| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0638 |
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| Symbol | mfd |
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| ID | 5388919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | + |
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| Start bp | 580075 |
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| End bp | 583011 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640861706 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001397800 |
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| Protein GI | 153951893 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTT CATTTTATGA ATACTTACAA AATCCAAAAA TTTGTGAACT TTTGCTTTGC
AAAGATGAAA AACAAGCAGA TTTACTTGCT CAAGTTTCAC GATTTAAGGG TTTGAAAACC
TTTGTTTTAC CTGATTTTAG GGCACAGTTT GGAGATGATT TAAGGGCTTT TTCTAAAGAA
CTTTTTGATC TTTGTAAGAT TTTAAATGCT TATTATAAAG AAGAAGAAAA AAAAATCCTT
ATTTCTCCTT TAAATACTGT TTTAAAAAAA CTTCCCTCGA AAAAACATTT ACAAAATTAT
TATATTGATA AAAAACAAAA TTTTGATTTG AAATTTTTTG AAGATGAAAT TTCAAGATTG
GGATATGAAT TTGTAGATAT AGTTCAGGAT AAAGGTGAAA TTTCAATTCG TGCGGATATT
ATTGATATTT TTTGTATCAA TGAGGAAAAT CCTATTAGAA TTTTACTTTT TGGCGAAGAG
ATTGAAAGCA TAAGATATTT TGATTTGCAA AGTCAAAAGT CTATTCCTAA TGAACTAGAA
CATTTTGAAA TTTGTCCTTT TTTAAAATAT TTTGACAAAG AAAATTATGA AATTTTTAAG
GACAAATTAG AAGATTTTCA AAGCGATACT TTAATACACG ATATTAATTC TTTAGGGTTT
TGGTGTATCG ATGATTTTTT TGATTATTTA GAGTTTGATT TTTTAGCTTG TGAAAAGTTT
GATATTAACG AATACGAAAA AGATATAAGC TTTGTGAATG CAAAAATTTT ACCTCAAGCT
AAAAAATTTA AAGAATTACA AAGTTCTTAC AATAAAGATT TTTTTGAATT TCATAAAAAT
AAAAAAATCA CGCTTTTAGC TAAAAATGAA GCTTTATTTA AAACTTTGGA GCTTGAAGAT
ACTCAAAATA TCCATTTTAT AAAAAGTGAT TTAAGACTTA ATCTTATTAG TCCTGAAGAG
CTCATCATTT CTTTAAATCA AAAAGAAAAA CAAAAAACAA GAAAAAAAGC TAGTTTGATT
ATAGATGAGC TTAAAAATGG GGATTATATA GTACACGAAG ATTATGGGGT GGGTAAATTT
TTAGGCCTTG AGATGATAGT GATAAGCGGA GCAAAAAAAG AGTTTGTTGC TATAGAGTAT
CAAAATTCTG ATAAGCTTTT ATTGCCAGTG GAAAATCTTT ATTTGATTGA TAAATATTTG
GGCGTGAGTG GATCTATTCC AAGTTTAGAT AAACTAGGTA AAACAAGCTT TATTAAACTT
AAAGAAAAAT TAAAAACTAA ACTTTTAGCT ATAGCTTCTG AAATTGTTAT TATGGCGGCT
AAAAGATCTT TAGTGCAAGC AAAAAAAATC ACAGTGGATT TAAATAGACA GACTGATTTT
ATAGCTAGTG CGGGTTTTAT TTATACAAGT GATCAAGATA AAGCCTGCCA TGAAATTTTG
CAAGATTTTC AAAATGGAAA AGTCATGGAT AGGCTTTTAA GCGGTGATGT GGGTTTTGGA
AAAACAGAAG TTGCTATGAA TGCTATTTAT CCAGTGGTTA AAAGTGGATT TTGTGCATTT
TTATTTGCAC CTACAACTTT GCTTTCTCAT CAGCATTATA AAATCTTAAA AAAGCGTTTT
GATCCTTTTG GTATAAAAGT GTTTAAGCTT GATCGCTTTA CAAGTAGTGC AGAAAAAAAA
CAAGTTTTGC AAAATTTAAA AGAAAATAAA GCTTGTGTAG TTGTAGGAAC TCACGCGCTT
TTAAGTGTAG AATGTGAAAA TTTAGCTCTT GTTATTATCG ATGAGGAGCA TAAATTTGGA
GTGAAGCAAA AAGAAAAGCT TAAAGAAATC ACCCAAAATT CACATATTTT ATCCATGTCA
GCAACCCCTA TACCAAGAAG CTTAAATCAA GCTTTAAGTT CTATAAAATC TTATAGTGTT
TTGCAAACTC CACCAGAAGA TAGAATGGAT GTAAGAACCT TTGTTAAAGA AAATGATGAC
GTACTTTTAA AAGAAGCTAT AGCAAGAGAG TTAAGACGTG GCGGGCAAAT TTTTTATATT
CATAATCATA TTGCAAGCAT AGAGCAGTGC AAAAAGCATT TATTAGAACT TTTTTCTACT
TTGCGTATTT TGATTTTACA TTCTAAAATC GATGCCAAAG TACAAGAAGA AGAAATGTTA
AAATTTGAAA ATAAAGAATA TGATTTGCTT TTAAGTACTT CTATCGTAGA AAGTGGGATT
GATTTGCCTA ATGCAAATAC TATCATAGTA GAAAAAAGCG ATCGTTTTGG CATGGCCGAT
TTACATCAAT TGCGTGGGCG TGTGGGAAGA AGTGATAAGC AAGGCTATTG TTATTTTTTA
ATCGAAGATA AAAATGCCAT CACAAAAGAT GCTTTAAAGC GTCTTGTTTC TTTAGAAAGT
AATTCTTTTT TAGGTGCAGG TTCTGTTTTG GCTTATCATG ATCTTGAAAT TCGTGGCGGT
GGAAATTTAT TAGGCGTGGA TCAAAGTGGA CATATCGAGC AAATTGGATA TAGTTTATAT
CTTAAAATGT TAGAAGATGA ACTTAATGCT TTAAGTAAAA ATGAAGTGGA TCAAAAAGAA
AATAAACTTG ATTTAAAACT CAATGTTAAT GCCTTTTTAA ATAGCGATCT TATCAGTGAA
GATCGCCTAA GATTAGAACT TTATAGAAGA CTTAGCAAGT GTGAGCAAGT TCATGAGGTT
TATGAGATTG AAGGTGAAAT TGAAGATCGC TTTGGAAAAC TTGACGTTTA TACTAAGCAA
TTTTTATCTT TGATTATTAT TAAAATTTTA GCTTTAAATA AATTTAAAAG TATTAGCAAC
TATGAGCAAA ATATTCAATT TACTGCTTTA AATGATGAAA AAGAACTCAT CAAAGCAAAA
AGCAAAGACG ATGATGATAT TTTAGAGGCA ATTTTAACGC ATTTAAGAAA GGCTTAA
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| Protein sequence | MQASFYEYLQ NPKICELLLC KDEKQADLLA QVSRFKGLKT FVLPDFRAQF GDDLRAFSKE
LFDLCKILNA YYKEEEKKIL ISPLNTVLKK LPSKKHLQNY YIDKKQNFDL KFFEDEISRL
GYEFVDIVQD KGEISIRADI IDIFCINEEN PIRILLFGEE IESIRYFDLQ SQKSIPNELE
HFEICPFLKY FDKENYEIFK DKLEDFQSDT LIHDINSLGF WCIDDFFDYL EFDFLACEKF
DINEYEKDIS FVNAKILPQA KKFKELQSSY NKDFFEFHKN KKITLLAKNE ALFKTLELED
TQNIHFIKSD LRLNLISPEE LIISLNQKEK QKTRKKASLI IDELKNGDYI VHEDYGVGKF
LGLEMIVISG AKKEFVAIEY QNSDKLLLPV ENLYLIDKYL GVSGSIPSLD KLGKTSFIKL
KEKLKTKLLA IASEIVIMAA KRSLVQAKKI TVDLNRQTDF IASAGFIYTS DQDKACHEIL
QDFQNGKVMD RLLSGDVGFG KTEVAMNAIY PVVKSGFCAF LFAPTTLLSH QHYKILKKRF
DPFGIKVFKL DRFTSSAEKK QVLQNLKENK ACVVVGTHAL LSVECENLAL VIIDEEHKFG
VKQKEKLKEI TQNSHILSMS ATPIPRSLNQ ALSSIKSYSV LQTPPEDRMD VRTFVKENDD
VLLKEAIARE LRRGGQIFYI HNHIASIEQC KKHLLELFST LRILILHSKI DAKVQEEEML
KFENKEYDLL LSTSIVESGI DLPNANTIIV EKSDRFGMAD LHQLRGRVGR SDKQGYCYFL
IEDKNAITKD ALKRLVSLES NSFLGAGSVL AYHDLEIRGG GNLLGVDQSG HIEQIGYSLY
LKMLEDELNA LSKNEVDQKE NKLDLKLNVN AFLNSDLISE DRLRLELYRR LSKCEQVHEV
YEIEGEIEDR FGKLDVYTKQ FLSLIIIKIL ALNKFKSISN YEQNIQFTAL NDEKELIKAK
SKDDDDILEA ILTHLRKA
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