| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0630 |
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| Symbol | secD |
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| ID | 5390009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009707 |
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| Strand | + |
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| Start bp | 570825 |
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| End bp | 572405 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640861700 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001397794 |
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| Protein GI | 153951508 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATT CTAAAATCAA TTATCGATTG ATTATTTTTA TAGCGGTATT TATTTTTGGA
GTGACTTTTT CACTCCCTTC TTTTTTGCAG TCAGAATGTG GTGCGAAGAT TAATTTAGGG
CTTGATTTGC AAGGTGGGCT TTATATGCTC TTAGGTGTAG ATAATGAAGA AGCTGTAAAA
TCTAAAATAA AATCAATTGC ATCTTCATTG AGCTATTCTT TTAATAAAGA AAATATTTTA
AATGATGGCT TAAATACCCA TGATGATATT TTAGAATTTA CTTTGCTTGA TAATGCGGAT
ATTGCAAAAG TTGAAAATTT GCTTAAAGAA ATAAAAGGAA TTAATATACA AAGTGAAAAT
ATGCACTATA AGATTTCTTT TACCTCAGAA GAAGTAAAAA ATATAGAAAA TTTTGCACTT
TTGCAAGCAG TTGAAACCAT AAGAAATAGG CTTGATCAAT TTGGTTTAGC AGAGCCAACA
GTTGCTAAAC AAGGTGATGA TAAGATTTTG GTTGAACTTG CGGGGATTAA AACCAAAGAA
GATGAACTAA GAGCAAAAGA ACGCATCACA AAAGCAGCAC ATTTGCAACT TATGGAAGTT
GATGATTCTA AAATGGGTCA AGCTTCTACA ATGAGCGATG CTGAGGTTGC GAGTTATGGA
CTGATTTTAG TGCCTGATTC TAGAAATTCA AATTTAAAAT ATACCTTAAA AAGCGTACCT
ATTTTAGATG GATCCATGCT TACTGATGCT AGAGTAGGGA TTAGCGATAA GAGTAATTAT
CCTGTGATTA ATTTTACTTT AAATGCCGAG GGTTCTAAAA AATTTGCTGA TTATACAGGA
GCAAATGTTG GAAAGCGTCT TGCTATTGTA CTTGATAATA AAGTGTATTC TGCCCCATCT
ATCAATGAAC GCATAGGTGG AGGTAGCGGG CAAATCAGTG GAGCTTTTAC TCAAGAAGAA
GCACGCGATG TGGCGGTAGC TTTAAGAAGT GGAGCTTTGC TTGCGCCTGT AAAATTACTT
GAACAAAGAA GTATAGGACC ATCTTTAGGT GCTGATAGTA TTAAAATGAG TATGATAGCT
TTAATCGGTG CATCGGTTTT TATTGTAATA TTTATGATGA TGTATTACGG TGTGGCAGGA
ATTTTTGCAA ATATTGCAAT GTTAGTTAAT GTTTTAGTAG TAGTGGCTGT TATGGCTATG
TTTGGAGCAA CTTTAACTTT ACCAGGGATG GCAGGACTTG TTTTAACTGT GGGTATGGCA
GTAGATGCAA ATGTGATTAT CAATGAGCGC ATACGAGAAC TCTTGCGAGA TGGAGTAAAT
ATAAGAGCTA GCATAGAACA AGGTTATAAA AATGCTATGA GTGCGATTAT AGATTCAAAT
ATTACTTCTT TGGTTACTTC AGTAGCGCTT TATGCTTATG GAACAGGAGC GGTTAAAGGT
TTTGCTGTAA CCTTGGGAAT TGGTATTGTT GTTTCTATGA TTACAGCTAT TTTAGGGACA
CATGGAATGT TTGATTATTT TATGCAACGC ATAGAAAAAA GTAATAATAC AAGATTTTGG
TTTGGCTATA GGAGAAGATA A
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| Protein sequence | MRNSKINYRL IIFIAVFIFG VTFSLPSFLQ SECGAKINLG LDLQGGLYML LGVDNEEAVK
SKIKSIASSL SYSFNKENIL NDGLNTHDDI LEFTLLDNAD IAKVENLLKE IKGINIQSEN
MHYKISFTSE EVKNIENFAL LQAVETIRNR LDQFGLAEPT VAKQGDDKIL VELAGIKTKE
DELRAKERIT KAAHLQLMEV DDSKMGQAST MSDAEVASYG LILVPDSRNS NLKYTLKSVP
ILDGSMLTDA RVGISDKSNY PVINFTLNAE GSKKFADYTG ANVGKRLAIV LDNKVYSAPS
INERIGGGSG QISGAFTQEE ARDVAVALRS GALLAPVKLL EQRSIGPSLG ADSIKMSMIA
LIGASVFIVI FMMMYYGVAG IFANIAMLVN VLVVVAVMAM FGATLTLPGM AGLVLTVGMA
VDANVIINER IRELLRDGVN IRASIEQGYK NAMSAIIDSN ITSLVTSVAL YAYGTGAVKG
FAVTLGIGIV VSMITAILGT HGMFDYFMQR IEKSNNTRFW FGYRRR
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