Gene JJD26997_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0621 
Symbol 
ID5389983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp559558 
End bp561633 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content29% 
IMG OID640861692 
ProductATP-dependent DNA helicase UvrD 
Protein accessionYP_001397786 
Protein GI153952234 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.258916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT TTGAAGATTT AAATGATAGT CAAAAACAAG CGGTAAGCCA CATTGATGGA 
GCTATGCTTA TCCTAGCAGG TGCAGGTAGT GGAAAAACCA AAACTATCAC CACTCGTCTT
GCTTATCTTA TCGGTGAAGT AGGCATCCCC TCGTATAACA CTCTTACTCT TACTTTTACA
AATAAAGCAG CTAGTGTTAT GCGTCATAGA GCATTAAATT TTCTACAAGG CAATCATAAT
CCTTTGCTTT GCACCTTTCA CAAATTTGGA CTTTTATTTT TAAAGCTCCA TTTTGAAAGA
TTGGAGCGTA AAAATAGTTT TATTGTTATC GATACAGATG ATACAAAAAA AATAATTAAA
GACTTAATCC ATGATAAAAA CAAAGACAAT GTCTATGATA TTATCAAATA CATATCTTAT
TGCAAAAATG AAGGCAAAAG AGTAAGTAAT GTCTTTAAAG ATTTAAATTT ACTAAAAGAA
CATAATTTTG AAAAATATCA AAATGAATAC AAATTTGCCA ACTATTACCG TGCTTATGAA
GAATACTTAT TAAAACAAAA TTTTGTGGAT TTTGATGATC TTTTATTGCT AAGCAATCTC
ATTTTAGAAA ATGATATAAA TTTTGCCAAA GAACAAAGCT TACTTTATAA TTATATTACA
GTTGATGAGT ATCAAGATAC TAATACCTTG CAATATAAAA TTCTAAAAAA TCTATGTTGT
ATGCATGAAA ATATCACAGT TGTTGGTGAT GATGATCAAA GTATTTATAG TTGGCGTGGA
GCAAAAATTG AAAATATTTT AAATTTTCAA AATGATTTTA AAAATGTTAA ACTTGTAAAA
CTTGAACAAA ACTATCGTTC AGTAGGGACT ATTTTACAAG CAGCAAATAA TCTCATATCT
CACAATGAGC AACGACTTGG AAAAACTTTA ATCTGTACTA AAGATACTGG GGAAAATATT
AAAATATTAA AAAATGAAAA CGAAAAAGAT GAAGGTTTAT ATATCGCTCA AGAAGTAAAA
AAATTGCTAA ATTCTGAAGT AGAAGCTAAA GAAATTGCCG TTTTATTTCG AGTTAATGCA
CTATCAAGAG CAATAGAAGA AGCATTTATG AAGGAAAAAA TTTCTTATAA ACTGCTTAGC
GGTATGCGTT TTTATGAGAG ATTAGAAATA AAAGATTTAA TCTCATATCT TAGACTTATC
TTAAATCCAA ACGATGATTT GTCGTTTAAA CGTATTATTA ATCGCCCTAA AAGATCCATA
GGAGAAAAAG CCCTAAAAAA TTTAGAAGAA TACGCAAAAA AACGTCAAAT TTCACTTTTT
GATGCCCTAT GCGAAAGCGA TGGTGGTGTA GGAATTTTAA CAACAAAAAA AGCACAAAAT
GAAGCAAATA TTTTTATACA AAATATTCAC ACTCTAAAAA GCTACGATAA TGCAAAAAAA
GTTTTTGACA ATATAGAAGA ATTATTTAAA ATCAAAGATT ATTTTTCAGA GCAAGATGAT
GGAGATGAAA GAATCAGAAA TCTTGACGAA TTTTACGCTA ATCTAAGAGA AAAACTCAAA
GAAGATCCCG AGGCTTCTTT AGAAGATCTA CTTAGTGAAA TTTCTTTATT AAGCGATCAA
GATAATTTAG ATGAAGAATG TGTTTGCTTG ATGAGCATTC ATGCTAGTAA AGGCTTGGAA
TTTGATTATG TTTTTATAAT AGGCTTTGAT GAAGGATTTT TTCCTTTAAA TAGCGAAGAA
AATCTTGAAG AAGAACGCCG TCTTGCTTAT GTTGCCATCA CTCGTGCCAA GAAATTTCTC
ACAATAAGTG TTGCAAATTC TCGTTTTTAT CATGGTTCAA GAGCAAACAT CAATCCTAGT
CGCTTCCTAG AAGAAAGTAA ATTAATCAAT GAAAAATCAA AAAATCAAAA TATACAAAAA
ACTAGTTTTT GCAAAGGAGA TCTAGTTAAA CATAAAATTT TTGGTATTGG CAGGATTGTT
GAAGTTAGTA AAAGCGGAAA AGAAGAAAAA CTTAATATTA ATTTTGGTGG TATAATGCGT
GTAATTATGG CAAGCTTTGT GGAAAAAGCA GTATGA
 
Protein sequence
MNLFEDLNDS QKQAVSHIDG AMLILAGAGS GKTKTITTRL AYLIGEVGIP SYNTLTLTFT 
NKAASVMRHR ALNFLQGNHN PLLCTFHKFG LLFLKLHFER LERKNSFIVI DTDDTKKIIK
DLIHDKNKDN VYDIIKYISY CKNEGKRVSN VFKDLNLLKE HNFEKYQNEY KFANYYRAYE
EYLLKQNFVD FDDLLLLSNL ILENDINFAK EQSLLYNYIT VDEYQDTNTL QYKILKNLCC
MHENITVVGD DDQSIYSWRG AKIENILNFQ NDFKNVKLVK LEQNYRSVGT ILQAANNLIS
HNEQRLGKTL ICTKDTGENI KILKNENEKD EGLYIAQEVK KLLNSEVEAK EIAVLFRVNA
LSRAIEEAFM KEKISYKLLS GMRFYERLEI KDLISYLRLI LNPNDDLSFK RIINRPKRSI
GEKALKNLEE YAKKRQISLF DALCESDGGV GILTTKKAQN EANIFIQNIH TLKSYDNAKK
VFDNIEELFK IKDYFSEQDD GDERIRNLDE FYANLREKLK EDPEASLEDL LSEISLLSDQ
DNLDEECVCL MSIHASKGLE FDYVFIIGFD EGFFPLNSEE NLEEERRLAY VAITRAKKFL
TISVANSRFY HGSRANINPS RFLEESKLIN EKSKNQNIQK TSFCKGDLVK HKIFGIGRIV
EVSKSGKEEK LNINFGGIMR VIMASFVEKA V