| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0578 |
|---|
| Symbol | hldE |
|---|
| ID | 5388678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 520381 |
|---|
| End bp | 521766 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640861653 |
|---|
| Product | D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase |
|---|
| Protein accession | YP_001397747 |
|---|
| Protein GI | 153952428 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGT TTTTAAGCCA GCAAAAACCT AAAATTTTAA TTATAGGGGA TTTTATGGTG
GATAATTACA CTTGGTGTGA TTGTTCGCGT ATCAGTCCTG AAGCCCCTGT TTTGGTAGCT
AAAACTCTTA AAGAAGATAA AAGATTAGGC GGGGCTGCGA ATGTTTATGC AAATTTAAAA
AGTTTAGGTG CTGATGTTTT TGCACTTGGT GTTGTGGGTG ATGATGAGAG TGGGAAATTT
TTACAAGAAA ATTTAAAAGG AGAATTTTTG ATCCAAAAAG GACGCAAAAC CCCTTTTAAA
AACCGCATTA TGGCACACAA TCAGCAGGTT TTAAGACTAG ATGAAGAAGA TACAAGTGAG
ATTTTGCTTG AAAATGAGCT TATTGCTTTG TTTGATGAAA AGATTAAAGA TTTTAAGGCT
GTGGTTTTAA GTGACTATGC TAAGGGTATT TTAACGCCCA AGGTTTGCAA AGCTTTGATA
AAAAAAGCTA AGGCTTTAAA TATCCCTGTT TTAGTTGATC CTAAAGGCAG TGATTTTAGT
AAATATAGCG GTGCAACCTT ACTTACGCCT AATAAAAAAG AAGCTTTAGA GGCTTTGAAA
TTTGAAAATT TAGAGGGTGA AAATTTAGAA AAAGGGATTA AAAAATTAAA AGAAGATTTT
GCTTTGCGTT ATTCTATCAT CACTCTTTCA GAAGCGGGGA TTGCACTTTT TGATAAGAGT
TTAAAAATCG CTCCTGCTAA AGCCTTAGAG GTTTATGATG TAACAGGAGC TGGCGATAGT
GTGATTGCGG TTTTGGCTTT TTGTCTGGCA AATGGGGTTG AAATTTTTAA AGCTTGCGAA
CTTGCCAATG AAGCCGCAGC TGTTGTGGTG GGTAAAATAG GTAGCGTGAG TGTGAGTTTT
GATGAGATTA AGAGTTTTAA TCGTGTGGAT TTTGAGAAAA AAATCAAAAG CAAAGAAGAA
CTTTTAACAC TCTTAAAACA AAAGGATAAA AAGATCGTTT TTACAAATGG TTGTTTTGAT
ATAGTGCATT TTGGGCATAT AAAATACCTT GAAAAAGCTA AAAGATTGGG CGATGTTTTG
ATTGTGGGTT TAAACTCAGA TGCGAGTGTG AAAAAACTCA AAGGCGAGAG TCGTCCTGTA
AATTCAGAGT TTCAAAGAGC TTGTATGTTG GCAGCTTTTT ATTTTGTAGA TTTTGTAGTG
ATTTTTGATG AAGATACGCC TTTGGAACTT ATAAGCTTTT TAAAGCCTGA TATTTTGGTT
AAAGGAGCTG ATTATAAAGA TAAAATTGTT GTGGGTGCGG ATATTGTTTC AAAGGTTGAA
TTAATCGACT TTGAAGAAGG ATTTAGTACA AGCAAGATCA TAGAAAAAAT AAAGGATAAA
AAATGA
|
|---|
| Protein sequence | MLEFLSQQKP KILIIGDFMV DNYTWCDCSR ISPEAPVLVA KTLKEDKRLG GAANVYANLK
SLGADVFALG VVGDDESGKF LQENLKGEFL IQKGRKTPFK NRIMAHNQQV LRLDEEDTSE
ILLENELIAL FDEKIKDFKA VVLSDYAKGI LTPKVCKALI KKAKALNIPV LVDPKGSDFS
KYSGATLLTP NKKEALEALK FENLEGENLE KGIKKLKEDF ALRYSIITLS EAGIALFDKS
LKIAPAKALE VYDVTGAGDS VIAVLAFCLA NGVEIFKACE LANEAAAVVV GKIGSVSVSF
DEIKSFNRVD FEKKIKSKEE LLTLLKQKDK KIVFTNGCFD IVHFGHIKYL EKAKRLGDVL
IVGLNSDASV KKLKGESRPV NSEFQRACML AAFYFVDFVV IFDEDTPLEL ISFLKPDILV
KGADYKDKIV VGADIVSKVE LIDFEEGFST SKIIEKIKDK K
|
|---|
| |