| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0550 |
|---|
| Symbol | fliR |
|---|
| ID | 5389504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 497868 |
|---|
| End bp | 498635 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640861631 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_001397725 |
|---|
| Protein GI | 153951433 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.826855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG TTAATTATTT AGGCGATAAA AATGTTGTAA CTTTTATGTT GCTTCTTGCT
AGAATGAGTG GCCTTATAGT TTTTTTTCCT TTTTTTTCAC ATAATTCTAT TCCTATGGTG
ATAAAAAGTA CTATAGTTTT ATTTTTGACT ATGTATTTAT ATCCTTTGGC TAGATTAGAA
TCTTTGCATT TAGATAGTTT TTTTGTTTTG CAGCTTATTA GTGAAGTGAT TTTTGGAATG
ATAGCAGGAC TTATGCTTCA AATTATTTTT GCTATTATTA TGATGGCGGG TGAGCAGATT
GCTTTTACTA TGGGATTTAC TATGGCAAGT ATATTAGATC CAAGTTCTGG GACGAGTATG
CCTATTACGG CACAAATTTT AAATTTGCTT GCTTTGATGT TTTTTCTTGC TTTTGATGGC
CATCATTTAA TGCTTTTGTT TTTAAGTCAT TCTTTAGGTT ATATTAGTTT AGGTGGATTT
TATCCGCATG AGAATTTAAT GCATTATTTA AATATAGGTA TGTTTAATAT TTTCATCATA
GGTTTTACTA TGAGCTTTCC TATACTTGGA ATTTCACTTT TAGCTGATGT TATTTTTGGA
CTTTTGATGA AAACAATGCC ACAATTTAAT CTTTTAGTTA TTGGCTATCC TATAAAGATA
GCTTTAGGTT TTGTAGTTTT GATTGCTATT TTACTAGTTA TGATGCAATA TTTTAAAAAT
TTAATTTTAG AACTTTTTAC TCATATGCAA ACTCTTTTTT TCTCCTAA
|
|---|
| Protein sequence | MEFVNYLGDK NVVTFMLLLA RMSGLIVFFP FFSHNSIPMV IKSTIVLFLT MYLYPLARLE
SLHLDSFFVL QLISEVIFGM IAGLMLQIIF AIIMMAGEQI AFTMGFTMAS ILDPSSGTSM
PITAQILNLL ALMFFLAFDG HHLMLLFLSH SLGYISLGGF YPHENLMHYL NIGMFNIFII
GFTMSFPILG ISLLADVIFG LLMKTMPQFN LLVIGYPIKI ALGFVVLIAI LLVMMQYFKN
LILELFTHMQ TLFFS
|
|---|
| |