Gene JJD26997_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0549 
Symbol 
ID5389598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand+ 
Start bp497246 
End bp497881 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content31% 
IMG OID640861630 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001397724 
Protein GI153951318 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.977002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCT TAAGAGCGGA AAATTTAAGC CATAGTTTTG ATTATCCGCT TTTTGAGGGT 
TTAAATCTTA CTTTAAATAC CAAAGATTGC ATTGCTATTC AAGGGAGTAG CGGTTGTGGT 
AAATCTACTC TTTTGCATAT ACTTTCTTCT TTATTAATTC CAAAAAAAGG TGAAGTTTTT 
TTTAAAGGCT CTAGTCTTTA TCAGATAGAT GAAAACGAAA GATTAAAAAT TCGCCGTTAT 
GATTTTGGTA TTATTTTTCA GACACATTAT CTTTTTAAAG GTTTTTCAGC TTTAGAAAAT 
ATCGAACTTG CTAGTGTTTT ATCGGATCAA GATTTAGATG AGAAAATTTT AAAAAGATTA 
GGTATTGATA CGCTTTTACA TCAAAAAATA GGAAAGCTTA GCGGTGGACA ACAACAGCGT 
GTGAGTATCG CACGTGTGCT TTGTAAAAAA CCAAAGATTA TTTTTGCTGA TGAGGCAACT 
GGAAATTTGG ATTTTGATAA TGCTAAAAAT GTTATCGAAC TTTTAATTTC CTATGTCAAA 
GAAAATGATG CAGCTTTATT TTTTGTAACT CACGATAGCA AGCTCGCAAG TTTTTGCGAT 
GAAACTTATA CTATAAACGC CAATGGAATT TGTTAA
 
Protein sequence
MELLRAENLS HSFDYPLFEG LNLTLNTKDC IAIQGSSGCG KSTLLHILSS LLIPKKGEVF 
FKGSSLYQID ENERLKIRRY DFGIIFQTHY LFKGFSALEN IELASVLSDQ DLDEKILKRL 
GIDTLLHQKI GKLSGGQQQR VSIARVLCKK PKIIFADEAT GNLDFDNAKN VIELLISYVK 
ENDAALFFVT HDSKLASFCD ETYTINANGI C