Gene JJD26997_0541 details

Gene Information

• Locus tag: JJD26997_0541
• Symbol: gidA
• ID: 5390331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: +
• Start bp: 488780
• End bp: 490639
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640861623
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001397717
• Protein GI: 153951262
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATG TCATTGTTAT AGGTGGTGGA CATGCAGGTG TTGAAGCAAG TGCTGCTGCT 
GCTAGAATGG GTAAAAAAAC CTTACTTTTA ACTACATTGA TCGAGCAAAT AGGAGCAGCA 
AGTTGCAATC CAGCTATAGG TGGACTTGCT AAAGGGCATT TGGTAAAAGA ACTTGATGCC 
ATGGGTGGTT TTATGGGTGA AATCACCGAT GAAGCAGGGA TACAATTTCG TATTTTAAAT 
GAAAGTAAAG GTGTAGCTGT TCAAGGAAGT AGGGTGCAAA TTGATATGGA TAAATATCGT 
ATCATTGCGC GCAATAAACT TTTAAAACTT CCAAATTTAG AAATCTCTCA AGAACAAGTG 
AGTGCTTTAA TCGTAGAAAA TGATAAAGTT AAAGGCGTAA AAACAAATTT AGAAAATATA 
TATTTTGCCA AAAAAGTGAT ACTTACAACA GGAACTTTTT TAAATGGACT CATTCATGTA 
GGTGAAAATA AACTTCAAGC AGGAAGAGTA GGGGAGCTTG CTTCAGTAAA TTTAGGAAAC 
TATTTACAGA CTTTGGGTTT AAAAATGGGA CGTTTAAAAA CAGGAACTTG TCCGAGAGTG 
GATGCAACAA GCATTGATTT TAGCGTACTT GAAATTCAAG ATGGCGATGT AAATCCTAAA 
GCTTTTAGCT TTCGTTCAAG AAATTTTAAT CCTACTCAAC TTCCTTGTTA TATCGCACGT 
ACTAATACAA CTACACATGA GATTATTAAG AATAATTTTT ATCGTGCCCC ACTTTTTACA 
GGTCAGATTG AAGGTGTGGG GCCAAGGTAT TGTCCTTCTA TAGAAGATAA GATCAATCGT 
TTTAGCGACA AAGAAAGCCA TCATCTTTTT ATAGAGCCTC AAACTATCGA TGCGACGGAG 
TATTATATCA ATGGTTTTTC TACTTCTTTA CCTTATGAAG TGCAAACTCA AATGCTGCAT 
TCTGTAAAAG GTTTTGAAAA TGCTAAAATA ACCCGTTTTG GTTATGCTAT AGAATATGAT 
TATATAGAGC CAACTGAACT TAAGCATACT TTAGAACTTA AAAAGATTAA AAATCTTTAT 
TGTGCAGGAC AGATTAATGG AACTACGGGT TATGAAGAGG CTGCAGTACA AGGCTTTATG 
GCAGGAATCA ATGCAAGTTT AAGCATAGAT ATGAAAGAAC CTTTGATTTT AAGGCGTGAT 
GAAGCTTATA TAGGAGTTTT AATCGATGAT TTAGTAGTAA AAGGCACAAA AGAACCTTAT 
AGAATGTTTA CTTCAAGGGC AGAATTTAGA CTACTTTTAA GGGAAGAAAA TGCTATACTT 
AGACTTGGAA AATATGGCTA TGTTTTAGGG CTTTTAAGCG AGCAAGATTT TGCTTATATA 
CAAAATATTG CAAACAATCT TCAAAAAGGA CTTGAATTTT TACTTTCTAA AGAATTTACA 
CCTAATAACC AAAATAATGC TTTTTTAGAG AGTTTAGGAG AGGATAAAAT TTCTTCTATA 
GTCAATTTTC AAAAAATTGT TGCAAGAGCA AGTTTTGATA TAGAAAAATT AAAAAAACTT 
GATCCTATGT TTGAAACCAT GGATAATTAC TCTTTAAGAG AGATTTTAAA CGAGGCAAAG 
TATTGTCATT ACATCAGTAT GCAAAAAGCT CAAGTAGAAA AAATGAAAAA TCTTAGTGAG 
CTTAAAATTC CTGAAAATTT TGATTTTAAA AGTGTAAGCG GTTTGAGTAA TGAGGTTGTA 
GAAAAACTTA ATCATCATAA ACCTCCAACC ATTTTTGCTG CAAGTCAAAT CAGTGGAATC 
ACTCCTGCGG CGTTAGATAT TTTACAAATT TATATCAAAA TGCAAAAGAA AAAAGCTTAA 

 

Protein sequence

MFDVIVIGGG HAGVEASAAA ARMGKKTLLL TTLIEQIGAA SCNPAIGGLA KGHLVKELDA 
MGGFMGEITD EAGIQFRILN ESKGVAVQGS RVQIDMDKYR IIARNKLLKL PNLEISQEQV 
SALIVENDKV KGVKTNLENI YFAKKVILTT GTFLNGLIHV GENKLQAGRV GELASVNLGN 
YLQTLGLKMG RLKTGTCPRV DATSIDFSVL EIQDGDVNPK AFSFRSRNFN PTQLPCYIAR 
TNTTTHEIIK NNFYRAPLFT GQIEGVGPRY CPSIEDKINR FSDKESHHLF IEPQTIDATE 
YYINGFSTSL PYEVQTQMLH SVKGFENAKI TRFGYAIEYD YIEPTELKHT LELKKIKNLY 
CAGQINGTTG YEEAAVQGFM AGINASLSID MKEPLILRRD EAYIGVLIDD LVVKGTKEPY 
RMFTSRAEFR LLLREENAIL RLGKYGYVLG LLSEQDFAYI QNIANNLQKG LEFLLSKEFT 
PNNQNNAFLE SLGEDKISSI VNFQKIVARA SFDIEKLKKL DPMFETMDNY SLREILNEAK 
YCHYISMQKA QVEKMKNLSE LKIPENFDFK SVSGLSNEVV EKLNHHKPPT IFAASQISGI 
TPAALDILQI YIKMQKKKA