Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0497 |
Symbol | htrA |
ID | 5389357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 445955 |
End bp | 447373 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640861586 |
Product | protease DO |
Protein accession | YP_001397681 |
Protein GI | 153950970 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0231688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TTTTTTTATC ATTAAGTTTA GCAAGTACTT TATTTGCTGC AAGTATTAAT TTTAACGAAT CAACTACAAC AGCTAATCGT GTAAATCCTG CCGCTGGAAA TGCAGTGCTT TCTTATCATG ACTCTATTAA AGATGCAAAA AAATCAGTGG TTAACATTTC CACCTCAAAA ACTATTACAA GAGCGAATCG TCCAAGCCCT TTGGATGATT TTTTTAATGA TCCTTATTTT AAACAATTTT TTGATTTTGA TTTTCCTCAA AGAAAAGGAA AGAATGATAA AGAAGTGGTA AGTTCTTTAG GATCAGGGGT GATTATTTCA AAAGATGGTT ATATAGTAAC AAATAATCAC GTTGTAGATG ATGCTGATAC GATTACAGTG AATTTACCAG GAAGCGATAC AGAATATAAA GCAAAACTTA TAGGTAAAGA TCCAAAAACA GATTTGGCTG TTATAAAAAT AGAGGCTAAT AATCTTTCAG CTATTACTTT TACAAATTCT GATGATTTAA TGGAAGGAGA TGTTGTTTTT GCACTTGGAA ATCCTTTTGG AGTCGGTTTT AGTGTTACAA GTGGGATAAT ATCTGCTTTA AACAAAGACA ATATAGGTTT AAATCAATAT GAAAATTTTA TACAAACAGA TGCTTCTATC AATCCAGGAA ATTCAGGTGG AGCTTTGGTG GATAGTCGTG GATATTTAGT AGGTATTAAT TCAGCTATTC TTTCTCGTGG AGGTGGAAAC AACGGCATAG GTTTTGCTAT ACCTTCAAAT ATGGTTAAAG ATATAGCTAA AAAACTTATT GAAAAAGGTA AGGTTGATAG AGGATTTTTG GGTGTGACTA TTTCAGCTTT GCAAGGTGAT ACTAAAAAAG CTTACAAAAA TCAAGAAGGA GCTTTAATCA CTGATGTTCA AAAAGGTTCA AGTGCTGATG AAGCAGGGAT TAAGCGTGGA GATTTAGTTA CTAAAGTTAA TGATAAGGTT ATAAAAAGTC CTATTGATCT TAAAAATTAT ATAGGAACTT TAGAGATTGG TCAAAAAATT TCATTAAGTT ACGAAAGAGA TGGAGAAAAT AAGCAAACAA GTTTTACTCT TAAAGGTGAA AAAGAAAATC CTAAAGGCGT ACAAAGTGAT TTGATTGATG GTTTGAGTTT GAGAAATTTA GATCCAAGGC TTAAGGATCG TTTGCAAATT CCAAAAGATG TTAATGGTGT TTTGGTTGAT AGTGTTAAAG AAAAGAGCAA AGGAAAAAAT TCTGGTTTCC AAGAGGGTGA TATTATCATA GGTATTGGAC AAAGTGAAAT TAAAAATTTA AAAGATCTAG AACAAGCTTT AAAACAAGTT AATAAAAAAG AATTTACCAA AATTTGGGTA TATCGCAATG GTTTTGCGAC TTTGCTTGTG CTTAAATAA
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Protein sequence | MKKIFLSLSL ASTLFAASIN FNESTTTANR VNPAAGNAVL SYHDSIKDAK KSVVNISTSK TITRANRPSP LDDFFNDPYF KQFFDFDFPQ RKGKNDKEVV SSLGSGVIIS KDGYIVTNNH VVDDADTITV NLPGSDTEYK AKLIGKDPKT DLAVIKIEAN NLSAITFTNS DDLMEGDVVF ALGNPFGVGF SVTSGIISAL NKDNIGLNQY ENFIQTDASI NPGNSGGALV DSRGYLVGIN SAILSRGGGN NGIGFAIPSN MVKDIAKKLI EKGKVDRGFL GVTISALQGD TKKAYKNQEG ALITDVQKGS SADEAGIKRG DLVTKVNDKV IKSPIDLKNY IGTLEIGQKI SLSYERDGEN KQTSFTLKGE KENPKGVQSD LIDGLSLRNL DPRLKDRLQI PKDVNGVLVD SVKEKSKGKN SGFQEGDIII GIGQSEIKNL KDLEQALKQV NKKEFTKIWV YRNGFATLLV LK
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