| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0492 |
|---|
| Symbol | |
|---|
| ID | 5389171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 441889 |
|---|
| End bp | 442509 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640861581 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein |
|---|
| Protein accession | YP_001397676 |
|---|
| Protein GI | 153951722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0923435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATG TATTTTTTGA TATGGATGGA ACTTTAATCG ATAGCGCAAA TGCCATTTCT
TGTGCAGTTA ATGAAATAAG GCAAGATTTA AACCTAGCCC CACTTTCAAG AAAAATCATT
ATGCAAACCA TCAATACTCC CAATATTGAC TGGGCAAAAG AACTTTATAA TATAGAAAAT
TTCCATCATT CTAGTTTTAA AGAAGGCTAT GAAAAATATT TTATCAAACA CTATGAACAA
AGCGTGGTGC TTTTTGAAGG AGTGAAAGAA CTTTTAGAAT TTTTAAAAAG CAAAAATTGT
TTTTTAGCTA TTGCTACTAA CGCCCCGCAA AGCTCACTTT CAAACATACT TAAAAAACAT
CAAATCATTC CTTATTTTGA TAAAATTTTA GGCGTAAGTT TAAGCATAGA ACCTAAACCT
CATCCTATGA TGCTAGAACT TTTAAAAAGC GAGGCTCCAT ATAAAACAAG CGTTTTTATA
GGGGATAGTC AAAAAGATAA AGAATGTGCT AAAAATGCTA ATTTACCTTA TTTTCATGCC
AAATGGTATC AAAAAGATTT AAAAGAAAAT GAATTTAGCA ACGCTAGTGA ACTTAAAGGC
TTTTTAGAAA AGTATTTATA A
|
|---|
| Protein sequence | MINVFFDMDG TLIDSANAIS CAVNEIRQDL NLAPLSRKII MQTINTPNID WAKELYNIEN
FHHSSFKEGY EKYFIKHYEQ SVVLFEGVKE LLEFLKSKNC FLAIATNAPQ SSLSNILKKH
QIIPYFDKIL GVSLSIEPKP HPMMLELLKS EAPYKTSVFI GDSQKDKECA KNANLPYFHA
KWYQKDLKEN EFSNASELKG FLEKYL
|
|---|
| |