Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0466 |
Symbol | porA |
ID | 5389914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 413861 |
End bp | 415183 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640861556 |
Product | major outer membrane protein |
Protein accession | YP_001397651 |
Protein GI | 153951167 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000223812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG TTAAACTTAG TTTAGTTGCA GCTCTTGCTG CAGGTGCTTT TTCAGCAGCT AACGCTACTC CACTTGAAGA AGCGATCAAA GATGTTGATG TATCTGGGAT ATTAAGATAT AGATTCGATA GTGCGTCTTT TGATAAAAAT TTCCCTAGTA AGGAAAGTTT AAATACTAGC AAACAAATGC ACAAATACAG AGCGCAACTT AACTTCAATA GTGCCATAGC GGATAATTTC AAAACTTTCA TTCAATTTGA CTACAACGCA CAAGATGGTG GTTATGGTGC TAAGCAAGTT AGAAATGATT TCAAACCTCT TAATGTTCGT CAAGTATACC TAACTTATAC AAATGAAGAT GTAGCTACAA GCATTATCGC TGGTAAGCAA CAGCTTAACG TTCTCTGGAC TGACAATGGT ATCGATGGTC TAGTAGTCAC AGGTGTAAAA GTAGTTAATA ATAGCATCGA TGGTTTAACC CTAGCTGCTT TTGCTGTAGA TAGCCTTATG GCTAGTGAAC AAGAAGGCGA CTTGATAGGA ACAAAAGATG GAATAAAGAC TGATGATACA AGTGTATATA ACGATCCTTT CAGCCCTTAT GTTCTAGGCA ATCAACACAA ACTCTCTGCC TCTGGTAACC TCTACGGTGC TGCTGTAATA GGTTCTTACG ACTTTATGGG CGGACAGTTT AACCCACAAT TATGGTTAGC CTACTGGGGT AAAATGGCAT TCTTCTATGG CTTAGACCTT GCTTATAGCA CAACAGTCTT TGATGGAATC AACTGGACTA TCGAAGGTGC TTATCTAGGA AACTCTGTTG ATAACAGACT TGAAAAAGAA GGTAAGATCG GCAATGGCAA CTTCTTTGCT TTAAGAGGTT CTATCGAAGC AAATGGCTGG GATGCTAGTC TAGGTGGTTT ATACTATGGT GAAAAAGACA AAGTTACAAC AACAGTGATT GAAGACCAAG GAAACTTAGA TTCTTTACTT GCGGGTCAAG AAATTTTCAA TACTACTGGT TCAAGACTAA ATGGTGACAC TGGTAGAAAC ATCTTCGGTT ATGTAACTGG TGGATATGCT TTCAACGAAA CAGTTCGCGT TGGTGCTGAA TTCATATACG GTGGAACAAA ATCAGGATCT GCTACTTATT TAGGAACAAG TGGCAGTAAA AAACTTGAAG CGGTTGCAAG AGTAAATTAT AAATACTCTC CAAAACTTAA CTTCTCAGCA TTCTATTCTT ATCTAAACCT AGATCAAGGT AAAAACACTA ACAAAAGTGC TGATCATAGC ACTGTAAGAC TTCAAGCTCT TTACAAATTT TAA
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Protein sequence | MKLVKLSLVA ALAAGAFSAA NATPLEEAIK DVDVSGILRY RFDSASFDKN FPSKESLNTS KQMHKYRAQL NFNSAIADNF KTFIQFDYNA QDGGYGAKQV RNDFKPLNVR QVYLTYTNED VATSIIAGKQ QLNVLWTDNG IDGLVVTGVK VVNNSIDGLT LAAFAVDSLM ASEQEGDLIG TKDGIKTDDT SVYNDPFSPY VLGNQHKLSA SGNLYGAAVI GSYDFMGGQF NPQLWLAYWG KMAFFYGLDL AYSTTVFDGI NWTIEGAYLG NSVDNRLEKE GKIGNGNFFA LRGSIEANGW DASLGGLYYG EKDKVTTTVI EDQGNLDSLL AGQEIFNTTG SRLNGDTGRN IFGYVTGGYA FNETVRVGAE FIYGGTKSGS ATYLGTSGSK KLEAVARVNY KYSPKLNFSA FYSYLNLDQG KNTNKSADHS TVRLQALYKF
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