| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0456 |
|---|
| Symbol | |
|---|
| ID | 5390485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 401964 |
|---|
| End bp | 403943 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640861546 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001397641 |
|---|
| Protein GI | 153951049 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000189951 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA TTTTTGTATT TTTAGTATTT GTTTTCACAA CTCTTTTTGG AGCTTATGAA
AATGAGCTTG CAAATTTCGA TAAAAATTTT ATTGGCTCTA AAAGCGAAGT GCAAGTAAAA
TTTCATCATC AACTGAAAAG CCTTTATATA CAAAGTATTA TCAATGAAGA TGAAAAAACT
AAAATGGAAA TTTTAAAAAG ATTGATCATC AGTTCAAATA CTTTAAATTT AGATGACAAG
TCATATGCTA ATGAGTTAAA AGAAAGTGGT ATAAGTGAAG CAAGTATCAA TGCTTTAAGA
AAGGCTGTTA TTAAAGATAT TAAGGTTCAA AATATTTCTC AAGACACTGA AAAATCAACT
TTTGAACCTA TAAAAACAGT TCAAAAAAAT GAAAAAAAAT CATCCAACGA ACAGGTAAAA
AATACAGAAA AAACAAATTC TAAAACTTCA CAAGCGCCAA AGAGTAGTAT CGCTTCTAAA
GCAAAAAGCG ATGATAAAAT TTATGTTTTA AAATCAAGTA AAACAAACCA AGGCGTAGAG
TTTGAACTAA ATGCAGATTT GGATAAGGAT CAATTAAAAA GTTTTGCGTT AGATGAAAAA
GGAAACTATC GTTTTATTAG TGATTTTGAT GGGGTTTTAG AAGGGGGTAA AAAAGAGTTT
AAATTTGATG ACTATCGTTT AGTGATTTCA CAATTTAATC CCAAAACCAT ACGCATAGTG
GTTTATGCTA AAGAAAAAAT TCCTATTGAT ATATCTTTTA AAGAAGAAAA ATTAATTTTT
TCAAAAGAAA CTGTTAATCA AAAAAAGACT GAGCAAGATA GTAAAATTTC AGAGAAAAAG
CAAGATCAAA AAACAGAAAT TAAAACCAAA GTTTTAGAAA CAAAAAAACA AGATAAAAAA
ACCAATAACG AAAAAGAAAA TCAAGAGCCT TTATATGTTT TAGATGTGGA TAAAATTTCT
AATGCCGTGG TATTAAATTT AAGTGATGAT TTAGATGAAA AAGAAATAGC AGTGTTTGAT
ACCAAAGATC AAAAATTCCG ATATGTTGTA AGTTTTAAGG GTGTGTTAGA AGGTAATAGA
AAAAGCTTTA CTTTTGGACA AAATGTGATT ACAGTTACTC AGTATAATCC AAAAACTGTT
CGTGTGGTTT TGAGTGCTCC TAAAGAATTT AAACTTTTAA AGGAGTTGGA TAATAAAAAT
CTCACTTTAG GTTTTTATAC GCAAACTACA AATCAAAATG TAAACAAAAA AGCAACCCAA
AGTTCTAGTA AAACTTTAAA TACAAATTAT AAATCAGGAA AGCTTGTGGT TATCGATGCA
GGGCATGGTG GAAAAGATAG CGGTGCTTTA AGTGATAAAA AAGGAAGTTT AAAAGAAAAA
GATATAGTTT TAAGCACGGC TTTAAAACTT GGAAATGAAC TTAAAAAACG CGGTTATAAA
GTGCTTTATA CTAGAAGTTC GGATAAATTT ATCAATCTTC GTGATAGGAC CAAATATGCT
AATGATAAAA GAGCGGATTT GTTTATTTCT ATACATACTA ATGCAGCACC AAATGCCACA
AAGGCCAAAA GTAGCGAAGG CGTGGAAACT TTCTTTTTAA GTCCTGCAAG AAGTGAAAGA
AGTAAAAAGG CAGCAGAAAA AGAAAATCAA GGGGATTTTG AAGAGATTAA TTATTTCTCA
AAACAAAGTA TTTTAAATTT CTTAAATCGT GAAAAAATCG TTGCTTCGAA TAAACTAGCC
ATTGATGTGC AAAAAAATAT ACTCACTCAA ACACGCAAAA AGTATAAAAT TGTCGATGGA
GGAGTAAGAG AAGCACCTTT TTGGGTTTTA GTAGGTGCGC AAATGCCTGC AATTTTGATT
GAAATTGGCT ATATCACACA TCCAAATGAA GGTAAAAGAA TCTCCAATAA AGCTTTTCAA
GATTTATTGG TTAAGGGCAT TGCCGATGGA GTTGAGAGTT ATTTTTATAA CAACCGATGA
|
|---|
| Protein sequence | MAKIFVFLVF VFTTLFGAYE NELANFDKNF IGSKSEVQVK FHHQLKSLYI QSIINEDEKT
KMEILKRLII SSNTLNLDDK SYANELKESG ISEASINALR KAVIKDIKVQ NISQDTEKST
FEPIKTVQKN EKKSSNEQVK NTEKTNSKTS QAPKSSIASK AKSDDKIYVL KSSKTNQGVE
FELNADLDKD QLKSFALDEK GNYRFISDFD GVLEGGKKEF KFDDYRLVIS QFNPKTIRIV
VYAKEKIPID ISFKEEKLIF SKETVNQKKT EQDSKISEKK QDQKTEIKTK VLETKKQDKK
TNNEKENQEP LYVLDVDKIS NAVVLNLSDD LDEKEIAVFD TKDQKFRYVV SFKGVLEGNR
KSFTFGQNVI TVTQYNPKTV RVVLSAPKEF KLLKELDNKN LTLGFYTQTT NQNVNKKATQ
SSSKTLNTNY KSGKLVVIDA GHGGKDSGAL SDKKGSLKEK DIVLSTALKL GNELKKRGYK
VLYTRSSDKF INLRDRTKYA NDKRADLFIS IHTNAAPNAT KAKSSEGVET FFLSPARSER
SKKAAEKENQ GDFEEINYFS KQSILNFLNR EKIVASNKLA IDVQKNILTQ TRKKYKIVDG
GVREAPFWVL VGAQMPAILI EIGYITHPNE GKRISNKAFQ DLLVKGIADG VESYFYNNR
|
|---|
| |