Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0445 |
Symbol | |
ID | 5388735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | + |
Start bp | 390441 |
End bp | 391409 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640861535 |
Product | ribosomal large subunit pseudouridine synthase A |
Protein accession | YP_001397630 |
Protein GI | 153951567 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTT TTTTAGTAGA TAAAAATTCA AGGCTTGATG TGTTTTTGGC TAAAAAATTA AACCAAAGTC GCAATCAAGT TGCTTTGCTT ATAGAAAAAG ATTGCGTACA GGTTAATGAT AAAATTCAAG ATAAAAATTC ATTTAAGCTT AAAAATGGTG ATATTATTTC TATTACAAGT TTAAAGCTTT ACGATGAGAT AAAACCTCAG TTTGAAGTGG ATTTTGATAT TGATATATTA TATGAAGATG AAGATTTACT TGTTTTAAAT AAACCTTCAA ATTTAGTCGT TCATGGAGCA AGTAGCGTTA AAAATGCTAC TTTGGTGGAT TGGTTGATAG AAAAAAAATA TACTTTATCA AATTTAGGAG GAGAGATAAG AGCTGGTCTT GTTCATAGAT TAGATAAAGA TACAAGCGGA GCTATACTAA TAGCGAAAAA TAACTTCACC CATCAAAAAT TAAGCGAGCA GCTTGCAGAT AAAAGCATGG GAAGAATTTA TCTTGCGTTA ATTGATTTGC CACTAAAAGA AGATAAAATT ATAGTAGAAA AATTTTTAAT GCGTTCGCCT TCTAATGCTA TTAAAAAAAT AGCCATAGAT AAGGAAAATA AATTCAGTAA AAATGCAAAA TCAGCTTTTA TAAATGTAGT AAAAACTGAA AATTTAACTT TGATGGCTGC TAAACTTTTT ACAGGAAGGA CTCATCAAAT TAGAGCGCAT TTAGCTAGTT TAAATCGCCA TATTTTGGGT GATAGCTTGT ATGGTTATAA GGGTAAGTAT GATTGTAGGA TAATGTTGCA TGCTTATTTT TTGTATTTTA TCCATCCAAA AACCAAAGAG CAAATTTTTG TTAAAGCACC TTTGATGGAA GATTTTAAAA ACATTATGTT TGAACAAATT AATTTAGGAG AGAATGATGA AAAGATTTCG CTTGAGTTTT TACTTGAGTT TTTTAACTCT TTTGCTTAG
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Protein sequence | MQTFLVDKNS RLDVFLAKKL NQSRNQVALL IEKDCVQVND KIQDKNSFKL KNGDIISITS LKLYDEIKPQ FEVDFDIDIL YEDEDLLVLN KPSNLVVHGA SSVKNATLVD WLIEKKYTLS NLGGEIRAGL VHRLDKDTSG AILIAKNNFT HQKLSEQLAD KSMGRIYLAL IDLPLKEDKI IVEKFLMRSP SNAIKKIAID KENKFSKNAK SAFINVVKTE NLTLMAAKLF TGRTHQIRAH LASLNRHILG DSLYGYKGKY DCRIMLHAYF LYFIHPKTKE QIFVKAPLME DFKNIMFEQI NLGENDEKIS LEFLLEFFNS FA
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