Gene JJD26997_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0394 
Symbol 
ID5389121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp349584 
End bp350555 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content34% 
IMG OID640861498 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_001397595 
Protein GI153952532 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.286083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAATA TTTTAGTTAC AGGTGCTGAT GGTTTTATAG GCTCTCATCT TTGTGAAAGT 
TTGATCAAAA AAGGTTTTAA AGTCAGAGCT TTAAACCAGT ATAATTCTTT TAATTTTTGG
GGACATTTAG AAAAAAGTCC TTTTTTAAAA GACATGGAAG TTATAAGTGG AGATTTAAGA
GATAGTTTTT TTTGCGAAAA AATCACCAAA AATATAGATG CGATCTTTCA TCTTGGCGCC
TTAATCGCTA TCCCCTACTC CTACACAGCC CCACAAAGCT ATGTAGATAC CAATGTCAAT
GGCACCTTAA ATATGCTCGA AGCAGCTAAA AAAAACGAAA TTTCACATTT TATCCACACC
TCAACAAGCG AAGTTTATGG CACGGCCTTT TATGTGCCCA TCGATGAAAA ACACCCTTTA
CAACCTCAAA GCCCTTATTC TGCAAGCAAA ATCGCTGCAG ATATGATGGC GCTAAGTTAT
TATAATTCTT TTAATTTAAA TGTCAATATC GCACGCCCTT TTAACACCTA TGGGCCAAGA
CAAAGCGCAA GGGCTATCAT ACCTACCATC ATCACGCAAA TTTTAAGCGG AGTAAAGGAA
ATCAAACTAG GAGATTTAAG CCCTAAAAGA GATTTAAATT TTGTGCTAGA TACTTGCGAG
GGTTTTATCT CTCTTTTAAA TTTAAAACAT TTTGGAGAAG TTTATAATAT AGGCTCAGGA
GTGGAACACT CCATGCAAGA AGTACTTGAT CTCATACAAA AAATTTTAGA TTCTAAGGTA
AAAATCATCC AAGATGAACA AAGATTGCGT CCTAAAAATA GCGAAGTTTT TAGACTTTGT
TGCGATGCAA ACAAGCTTAA AAAAGCTACA AATTGGCAAA GCAAAATAAG TCTAGAAGAA
GGTTTAAGAC AAAGCATAGA GTATTTTAAA GAAAATTTAG AAAATTATAA AAGTGAGCTT
TATAATGTTT GA
 
Protein sequence
MRNILVTGAD GFIGSHLCES LIKKGFKVRA LNQYNSFNFW GHLEKSPFLK DMEVISGDLR 
DSFFCEKITK NIDAIFHLGA LIAIPYSYTA PQSYVDTNVN GTLNMLEAAK KNEISHFIHT
STSEVYGTAF YVPIDEKHPL QPQSPYSASK IAADMMALSY YNSFNLNVNI ARPFNTYGPR
QSARAIIPTI ITQILSGVKE IKLGDLSPKR DLNFVLDTCE GFISLLNLKH FGEVYNIGSG
VEHSMQEVLD LIQKILDSKV KIIQDEQRLR PKNSEVFRLC CDANKLKKAT NWQSKISLEE
GLRQSIEYFK ENLENYKSEL YNV