Gene JJD26997_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0348 
Symbol 
ID5390427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp306690 
End bp307850 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content22% 
IMG OID640861461 
Producthypothetical protein 
Protein accessionYP_001397558 
Protein GI153951011 
COG category[R] General function prediction only 
COG ID[COG4128] Zonula occludens toxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000179966 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA CTTATATTGT TGGAAATCCT GGCAGTGGTA AAACTTATTT TGCGGTTAAT 
CAAATTTATG AATATTTTGT ATTACCCACT CTACCAAATA AAAGAATACT TGGTTTTGAA
ATCAAAAGAA AGTTAAAAAT CTTTGATTAT CTATATTGTT ATACTAATAT TAATGGTCTT
AAGTTCGATA TTAGCGATAA ATTAATTTCA TTTGATTTTG ATATTTTTTA TTTAAACTTA
ACTCATCTTT ATAATTTATA TAATCAAGGC TTAAATGATG ATGAGTTAAA TATAAAAGCA
AATGAATTAA ATCTTTTTAA AGTCATGTTT GTCATCGATG AAGCACACAA CTTTTTAAAA
AATAAAGATG ATAAAATCCT TATTTGGTGG CTTACTTATC ATCGCCATCT CCATCAGGAA
ATAATATTTA TAACTCAAGA TTTAAGTTTA ATATCAAATG AATATAAAAG AATTGCTGAA
TTCTTTTATA AAGCTTTAGA TAGTGGCAAA AGGATTTATA AAAATTCTTT AAGATACGTT
CAATTTTCAT CATATAAACT TTATCAAAAA GATATTGTCA CTCGTTTTTC TTTGTCTTTA
AATAAAGAAG TCTTTAGTCT TTACAAATCA GGAGATAATA AACCTAACAA ATCTTTTTTT
CTTAAGATTT TTACATTTTT ATTATTTTCT ATATTAACCT TAATTTTTTG CTTTTATATT
TTTATATCTT TTTTTAAATC TGATGAGATA AAAGAAAATA ATATAAGCAA AGAAAGCAAT
ATTAATTTAA ATCTTAATAT TAGCCCTAAT ACTATAAAAG ATAAAAGCGA AAATAATCTT
TTTTCTAATT TAGAATTAAT AGATGGCTCT TTAAAAGATT TACCATTAAA AAATGTTGAT
ATTAACAATA GTTCAGTTTA TAAAATCCTT TGCATTGATA CTACTTGCCA TATTGATGAT
AAAAATCAAA ATTTTATGCA TTTTCCCCTT GAGTATTTCC ATTTTATTTT AAATGAGTTT
CCTCCTATTT ATCATTATAA AAATAAAGTC AATAAGGGGT ATCAGCATTT TATAATTTTT
AATTTTGAAG TTTTTAATAA TTTAAAGAAA GGTGTTTTAA AAAATGAAAA AGATACTTCT
TTTACTCGTT CTTTGTTTTA A
 
Protein sequence
MAITYIVGNP GSGKTYFAVN QIYEYFVLPT LPNKRILGFE IKRKLKIFDY LYCYTNINGL 
KFDISDKLIS FDFDIFYLNL THLYNLYNQG LNDDELNIKA NELNLFKVMF VIDEAHNFLK
NKDDKILIWW LTYHRHLHQE IIFITQDLSL ISNEYKRIAE FFYKALDSGK RIYKNSLRYV
QFSSYKLYQK DIVTRFSLSL NKEVFSLYKS GDNKPNKSFF LKIFTFLLFS ILTLIFCFYI
FISFFKSDEI KENNISKESN INLNLNISPN TIKDKSENNL FSNLELIDGS LKDLPLKNVD
INNSSVYKIL CIDTTCHIDD KNQNFMHFPL EYFHFILNEF PPIYHYKNKV NKGYQHFIIF
NFEVFNNLKK GVLKNEKDTS FTRSLF