Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_0274 |
Symbol | |
ID | 5389418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 250728 |
End bp | 252029 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640861394 |
Product | multidrug ABC transporter |
Protein accession | YP_001397494 |
Protein GI | 153952466 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.351648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATA ATGTCTTACC CTTATCTTTC ATAGTTGGAA CAAGATTTTT TGGGCTTTTT ATAGTTTTGC CAGTTTTAAG TCTTTATGCT TTAAAACTTG AAGGTGTTAA TGAATTTTTA GTAGGACTTT TAGTTGGTGT TTACGCCTTA ACCCAAATGA TTTTACAAAT GCCTTTTGGG ATTTTAAGTG ATAAAATCGG TCGTAAAAAA ACCATGCTCA TTGGACTGAT TATTTTTATA ATAGGCTCTT TAATCTGCTC TTTTGCGGAA AATATCTACA CCATGCTTTT AGGAAGAATG CTCCAAGGCG CAGGGGCTAT TGGAGCTGTA GCTACAGCAA TGATAAGTGA TTTTATCACA GAAGAAAATC GCGGTAAAGC TATGGCGGTA ATGGGTTCTT TTATAGGGCT TAGTTTTGCA GCTTCTATGG TGATCTCTCC TTTAATGAGT GCAAAATGGG GTTTGTCTAG CCTTTTTGAT CTTAGTGCGG CTTTGTCTCT TTTATGTATA ATTTTACTTT ATACCGTTGT ACCTAAAGAA AATAAAATTA CTCATGAAAA TGAAAAAACT CCTTTTTTTC ATTTTATTAA ACAAAAAAAT TTAGCCCTTA TGAATCTTAC TAATTTCATG CAAAAAATGC TTATGAGTAT AGCATTTTTA AGCATTCCTA TTATTCTAGT AAAACATTTA GGCTTTGCTT TTGATAAACT TTGGATTGTT TATAGCGCTT CTATGGTGGC AGGTTTTATC GCTATGGGCT TTGCTGGAAG TTTAGGCGAA AAAAGAGGCT TGGCTAAACA AATTTTACTC TTAGGAATTG TTTTTTTCAT ACTTGCTTAT CTTTTCTTCG CTTTTAGTAA TTCTATAGAT TTTTTTATCA TAGCAGTTGT GATTTTTTTT ATAGGTTTTA ATTTACACGA GCCTATTATG CAAAGTTGTG CATCAAAATT TTGTAAAGTT CATGAAAAAG GCGCAGCATT AGGGTTATTT AATGCTTTTG GATATGGTGG AAGTTTTATA GGTGGTATTA TCGGAGGGAT GTTTTTACAT CTAAATGCCT TAAATCTTTT AGCTATTATT TTAGTGGTTT TAGCTCTAAT TTGGCTTGTG GCATTATTTT TCTTAAAAAA TCCAGCTGAT TTTAAAAACC TTTATCTACC TTTAGAAACG CCTTTAAATT TCAGTACTTT TAGTGAAAAT TTAGGGGTGG TAGATATTTA TAAAAACTCT AAAAATCTTG TTGTTAAATT TGATAGCAAA CTTACAAACA AAGAAGAACT AGAAGGCAAA ATTAAGATCT AA
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Protein sequence | MLNNVLPLSF IVGTRFFGLF IVLPVLSLYA LKLEGVNEFL VGLLVGVYAL TQMILQMPFG ILSDKIGRKK TMLIGLIIFI IGSLICSFAE NIYTMLLGRM LQGAGAIGAV ATAMISDFIT EENRGKAMAV MGSFIGLSFA ASMVISPLMS AKWGLSSLFD LSAALSLLCI ILLYTVVPKE NKITHENEKT PFFHFIKQKN LALMNLTNFM QKMLMSIAFL SIPIILVKHL GFAFDKLWIV YSASMVAGFI AMGFAGSLGE KRGLAKQILL LGIVFFILAY LFFAFSNSID FFIIAVVIFF IGFNLHEPIM QSCASKFCKV HEKGAALGLF NAFGYGGSFI GGIIGGMFLH LNALNLLAII LVVLALIWLV ALFFLKNPAD FKNLYLPLET PLNFSTFSEN LGVVDIYKNS KNLVVKFDSK LTNKEELEGK IKI
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