Gene JJD26997_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0274 
Symbol 
ID5389418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp250728 
End bp252029 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content31% 
IMG OID640861394 
Productmultidrug ABC transporter 
Protein accessionYP_001397494 
Protein GI153952466 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.351648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAATA ATGTCTTACC CTTATCTTTC ATAGTTGGAA CAAGATTTTT TGGGCTTTTT 
ATAGTTTTGC CAGTTTTAAG TCTTTATGCT TTAAAACTTG AAGGTGTTAA TGAATTTTTA
GTAGGACTTT TAGTTGGTGT TTACGCCTTA ACCCAAATGA TTTTACAAAT GCCTTTTGGG
ATTTTAAGTG ATAAAATCGG TCGTAAAAAA ACCATGCTCA TTGGACTGAT TATTTTTATA
ATAGGCTCTT TAATCTGCTC TTTTGCGGAA AATATCTACA CCATGCTTTT AGGAAGAATG
CTCCAAGGCG CAGGGGCTAT TGGAGCTGTA GCTACAGCAA TGATAAGTGA TTTTATCACA
GAAGAAAATC GCGGTAAAGC TATGGCGGTA ATGGGTTCTT TTATAGGGCT TAGTTTTGCA
GCTTCTATGG TGATCTCTCC TTTAATGAGT GCAAAATGGG GTTTGTCTAG CCTTTTTGAT
CTTAGTGCGG CTTTGTCTCT TTTATGTATA ATTTTACTTT ATACCGTTGT ACCTAAAGAA
AATAAAATTA CTCATGAAAA TGAAAAAACT CCTTTTTTTC ATTTTATTAA ACAAAAAAAT
TTAGCCCTTA TGAATCTTAC TAATTTCATG CAAAAAATGC TTATGAGTAT AGCATTTTTA
AGCATTCCTA TTATTCTAGT AAAACATTTA GGCTTTGCTT TTGATAAACT TTGGATTGTT
TATAGCGCTT CTATGGTGGC AGGTTTTATC GCTATGGGCT TTGCTGGAAG TTTAGGCGAA
AAAAGAGGCT TGGCTAAACA AATTTTACTC TTAGGAATTG TTTTTTTCAT ACTTGCTTAT
CTTTTCTTCG CTTTTAGTAA TTCTATAGAT TTTTTTATCA TAGCAGTTGT GATTTTTTTT
ATAGGTTTTA ATTTACACGA GCCTATTATG CAAAGTTGTG CATCAAAATT TTGTAAAGTT
CATGAAAAAG GCGCAGCATT AGGGTTATTT AATGCTTTTG GATATGGTGG AAGTTTTATA
GGTGGTATTA TCGGAGGGAT GTTTTTACAT CTAAATGCCT TAAATCTTTT AGCTATTATT
TTAGTGGTTT TAGCTCTAAT TTGGCTTGTG GCATTATTTT TCTTAAAAAA TCCAGCTGAT
TTTAAAAACC TTTATCTACC TTTAGAAACG CCTTTAAATT TCAGTACTTT TAGTGAAAAT
TTAGGGGTGG TAGATATTTA TAAAAACTCT AAAAATCTTG TTGTTAAATT TGATAGCAAA
CTTACAAACA AAGAAGAACT AGAAGGCAAA ATTAAGATCT AA
 
Protein sequence
MLNNVLPLSF IVGTRFFGLF IVLPVLSLYA LKLEGVNEFL VGLLVGVYAL TQMILQMPFG 
ILSDKIGRKK TMLIGLIIFI IGSLICSFAE NIYTMLLGRM LQGAGAIGAV ATAMISDFIT
EENRGKAMAV MGSFIGLSFA ASMVISPLMS AKWGLSSLFD LSAALSLLCI ILLYTVVPKE
NKITHENEKT PFFHFIKQKN LALMNLTNFM QKMLMSIAFL SIPIILVKHL GFAFDKLWIV
YSASMVAGFI AMGFAGSLGE KRGLAKQILL LGIVFFILAY LFFAFSNSID FFIIAVVIFF
IGFNLHEPIM QSCASKFCKV HEKGAALGLF NAFGYGGSFI GGIIGGMFLH LNALNLLAII
LVVLALIWLV ALFFLKNPAD FKNLYLPLET PLNFSTFSEN LGVVDIYKNS KNLVVKFDSK
LTNKEELEGK IKI