Gene JJD26997_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0273 
SymbolselA 
ID5388721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp247658 
End bp248980 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content30% 
IMG OID640861392 
Productselenocysteine synthase 
Protein accessionYP_001397492 
Protein GI153952149 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] 
TIGRFAM ID[TIGR00474] seryl-tRNA(sec) selenium transferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAT TTAGAACTTT TCCACAGATT AACACTCTTA TTCAAGATGA GAGTTTAAAA 
TCCTATCCTT TTTATATCAA AGCATTTTTT TGTAAAAAAG TTGTTGCAAA ACTAAAAGAA
AATTTTTCCC GAGATGAAAT TTCTAAAGAT AAACTACTTT TAGAAATCAA AAAAGAAATC
AAAACTTTTT ACCGCAAAGA TTTACAAAGT GTGATTAATG CAAGCGGAGT GGTTATACAC
ACAAACCTTG GCAGAAGTGT AATCCATGAA GAACTTTATG AAGCGTGTAA AGATATCATT
TGTAATTATT CTAATGTAGA GTTTGATTTA GAAAATGGAA AAAGAGGCTC TCGCTATGCT
TTGGTGTTGG AAAAACTTAA AATGCTTTTT GAATGTGAAG ATGCTTTAGT GGTAAATAAC
AACGCTGCGG CAGTTTTTTT AGTGCTTAAT TCTCTTTGTT ATGATAAAGA AGTCATAAGC
TCAAGAGGAG AACTTGTAGA AATTGGCGGA AGTTTTCGTG TGCCTGAAGT AATAAAAGCT
GCAGGTGTAA AGCTTTGTGA AGTTGGAACT AGCAACAAAA CACACTTAAA AGACTATGAA
CAAGCTATCA ATGAAAATAC CGCTCTAATT TTAAAAACTC ACAAGTCTAA TTTCGCTCTT
ATGGGTTTTC ACAGCGAAGT AAACATAAAA GATCTACATG AACTAGTAAA AGAAAAAGGG
CTTTTGAGTT ATTATGATCT AGGTTCTGGC TGGTGTGAAA ATTTAAATGA AAAGCTGATT
AAAAATGAAC CTAAAATCAA AAAACTCGTG CAAGAATGTG ATATTTTAAG TTTTAGCGGA
GATAAACTTT TTGGTAGTGT GCAAGCAGGC ATTATACTTG GAAAAAAAGA ACTCATAGGA
AAGCTTAAAC AAAATCAACT TTTAAGAATG CTAAGAGTGG ATAAATTAAC CCTATCTTTT
TTAAATGAAA GCTTAAAAGC TTATTTGCAA AAAGATTATG AAAAAATTAT TACCTTAAAA
CTTTTAAATG ACGACTTATC CTTTATAGAA GAAAAAGCTT TAAGGGTGCA AAAAGAATTA
AAATTTCAAA CCCAACTTAA AAAAAGCAAA AGTTTAGTAG GAGGAGGTTC TATGCCTGAT
AAAAGTTTAG ATACTTATAT ACTAACTTTT CAAGGAGATG CTTTAAAACT ACAAACTCGA
TTTAGAAAAG AAAATATCAT AGGACGCATT GAAAATGATG AATTTGTTCT TGATTTTAGA
ACTATACGAG AAAATGAACT TCAAAAACTT ATTCTTAAAA TCAATCAAAT GGAAAACTTA
TGA
 
Protein sequence
MNKFRTFPQI NTLIQDESLK SYPFYIKAFF CKKVVAKLKE NFSRDEISKD KLLLEIKKEI 
KTFYRKDLQS VINASGVVIH TNLGRSVIHE ELYEACKDII CNYSNVEFDL ENGKRGSRYA
LVLEKLKMLF ECEDALVVNN NAAAVFLVLN SLCYDKEVIS SRGELVEIGG SFRVPEVIKA
AGVKLCEVGT SNKTHLKDYE QAINENTALI LKTHKSNFAL MGFHSEVNIK DLHELVKEKG
LLSYYDLGSG WCENLNEKLI KNEPKIKKLV QECDILSFSG DKLFGSVQAG IILGKKELIG
KLKQNQLLRM LRVDKLTLSF LNESLKAYLQ KDYEKIITLK LLNDDLSFIE EKALRVQKEL
KFQTQLKKSK SLVGGGSMPD KSLDTYILTF QGDALKLQTR FRKENIIGRI ENDEFVLDFR
TIRENELQKL ILKINQMENL