Gene JJD26997_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0259 
SymbolmetC 
ID5389954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp237090 
End bp238253 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content34% 
IMG OID640861382 
Productcystathionine beta-lyase 
Protein accessionYP_001397482 
Protein GI153952348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01324] cystathionine beta-lyase, bacterial 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA AAACTAAACT TATTCATTGT GGCAGAGGCG ATCAAGGTGC TGAAGTAAGA 
TCAGTTAATC CTACACTTAT GCGTGCATCA ACCATACTTT TTAAAGATCA CGCAACTTGG
CAAAAATATA GAAAATTAAG AAAAACAGAT CGTGTTTTAA GCTATGGAGC TAGAGGAACA
ACAACCAATT TTGAACTTGA AAAACTTATT TGCACTCTAG AAGGTGGCTA TAGAGCACAA
CTTTTCCCAA CGGGACTTGC AGCATTAGCT ATGGTACTTT TAAACTATGC AAGCAAAGAT
GTGCATTTTT TAATCACCGA TGCAATTTAT GGGCCTGTAA GAACGATTTG CGAATTATTT
TTAGACAAAA TGGGAGTTGA AATTGATTTT TTAAAAGCTG ATGCAAGTGA TGTAGAAGAA
AAAATCAAAC CTAATACCAA GCTTATCCTA TGTGAAAGTC CAGGTTCTAT ACTTTATGAA
ATCATAGATT TACCAAAACT TTGCAAAATT GCTCATGCAC ATAATATCCC TGTAGCTATT
GACAATACTT ATTCTAGTGG ATATTTTCTA AATCCTTTAG AACTTGGAGT GGATATTTCA
GTTATCGCCG CTACCAAATA TCTTAGCGGA CACTCTGATG TAACCATGGG TATAGTAGTA
ATCAACGAAA AAGAATGGAA AAATTTTGAC AAACTTCCAG AAGCTTTAGG CTTTACAACA
AGCCCTGATG ATGCTTACTT AGTACTTCGT GGTATGAGAA CCCTAGATGT GAGAATGAAA
GCTCATGAAA AAAGTGCTGA TGAAATTGTA GAGTTTTTAC AAAGCAGAAA AGAAATTAAA
ACAATTTTCT ATCCAAAACT CAAATCCCAC CCAAATCATG AAATTTTCAT GCGTGATCAT
AAAGGTGTAA ATGGTATGAT TACTATAGAA TTTGCAGAAG GTTATAACAA AGATGATGCT
ATTAAATTTG TAGATAAATT AGAATACTTT TCAATTGGTG CTAGCTGGGG TGGATATGAA
AGCTTAGCCA CCGTAACTAC TCCGCCTAGA ACTGCAACAG ACCTAAGCGC AAGAGGACCA
TTTGTAAGAT TTCATATAGG TCTTGAAGAT ACTAAAGATT TAATTGCTGA TTTAACACAA
GCTTTTGATG GTATTAAAAA ATAA
 
Protein sequence
MNSKTKLIHC GRGDQGAEVR SVNPTLMRAS TILFKDHATW QKYRKLRKTD RVLSYGARGT 
TTNFELEKLI CTLEGGYRAQ LFPTGLAALA MVLLNYASKD VHFLITDAIY GPVRTICELF
LDKMGVEIDF LKADASDVEE KIKPNTKLIL CESPGSILYE IIDLPKLCKI AHAHNIPVAI
DNTYSSGYFL NPLELGVDIS VIAATKYLSG HSDVTMGIVV INEKEWKNFD KLPEALGFTT
SPDDAYLVLR GMRTLDVRMK AHEKSADEIV EFLQSRKEIK TIFYPKLKSH PNHEIFMRDH
KGVNGMITIE FAEGYNKDDA IKFVDKLEYF SIGASWGGYE SLATVTTPPR TATDLSARGP
FVRFHIGLED TKDLIADLTQ AFDGIKK