Gene JJD26997_0201 details

Gene Information

• Locus tag: JJD26997_0201
• Symbol: def
• ID: 5389808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. doylei 269.97
• Kingdom: Bacteria
• Replicon accession: NC_009707
• Strand: -
• Start bp: 187458
• End bp: 187985
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640861339
• Product: peptide deformylase
• Protein accession: YP_001397439
• Protein GI: 153951420
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAGAA AAATTATCAC TTATCCTAAT CCTAGACTTT TTTTAAACTC TGAAATTGTA 
AATAAATTTG ATACAGAACT TCATACCTTG CTTGATGATA TGTATGAAAC TATGATAGCA 
AGTAATGGAG TAGGTTTAGC AGCTATTCAA GTGGATATTC CTTTGCGTGT TTTACTTGTA 
AATATTTTTG ATGAAAATGA TGAACAAAAA AAAGAAGATT TGCTAGAGAT TATTAATCCT 
GAAATTATTC CTTTAGATGA AGAAATGATC ACTTGCACGG AAGGGTGTTT GAGTGTGCCA 
GATTTTTTCG AAGAAGTAAA ACGCTACAAT CATATCTTGC TTAAATATCA AGATCGCTTT 
GGAGAATTTA AAGAACTTGA AGCAAAGGGT TTTTTAGCTG TGGCTATACA GCATGAAAAT 
GATCACTTAA ACGGACATTT ATTTATAGAA AAAATTTCTT TTGCTAAGCG TCAAAAATTC 
GATAAAGAAT TTAAGAAAAA GAAGAAAAAT CATAAAAAAG AGAAATGA 

 

Protein sequence

MVRKIITYPN PRLFLNSEIV NKFDTELHTL LDDMYETMIA SNGVGLAAIQ VDIPLRVLLV 
NIFDENDEQK KEDLLEIINP EIIPLDEEMI TCTEGCLSVP DFFEEVKRYN HILLKYQDRF 
GEFKELEAKG FLAVAIQHEN DHLNGHLFIE KISFAKRQKF DKEFKKKKKN HKKEK