| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0078 |
|---|
| Symbol | sppA |
|---|
| ID | 5388643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 85072 |
|---|
| End bp | 85968 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640861232 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_001397333 |
|---|
| Protein GI | 153951329 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TAAAATCATT TTTTAAGGCT TTAGGATGCG GTATAAAATT TATCAATACT
TATTTTAAAA CCTTTGTTTT ATTGTTGATT GTTATATGGA TTTTGGTGCC TAGTGCAAAT
TCAAGCTCCA AGCTTGCAAA TTTAGAACGC ATTGATTTAA AGGGTGAAAT TTTTGATAGT
TCTGCAGTTT TAGAAAAAAT TATCAATGCT AAAAATGATA GCAATATCAA AGGAGTGCTT
TTTGTTATAG ACTCTCCTGG TGGAGCTTTT GCTCCTAGTA TGGAACTAGC TCTAGCTATA
AAGGATTTAA AAATTAAAAA GTCTGTGCTT GTTTATGCAA GCGGAACTAT GGCAAGTGGA
AGTTATTTAG CAGGAGTTGG AGCGAATAAA ATTTTAGCCA ATCCGGCAAG TTTTATAGGC
TCTATTGGTG TGATTATGCA AGGAGCTGAT TTAAGCGGAT TGGCTAATAA ACTCGGCATT
AAAGAACAAA CTATTCAAGC GGGTGAATTT AAAAGTGCTG GAACTTTTGC AAGAGCTTGG
AATGAGAATG AAAGAAATTT TTTACAGGGT TTAATTGATC AAAGTTATGA TCTTTTTACA
GGTTTTGTTG CCAAGGAAAG AGTACTAGAT CTTAACAAAA AAGATCAGTG GGCAAATGCA
AGAGTATTTT TAGCTGCCAA GGCTAAGGAA CTTGGTCTTA TAGATGAGCT TAGTAATTAT
GAAAATGCCA AAAAGGAGCT TGAAAAACTT GCTAATGTTT CAAATCCTAT TTGGAAAGAA
GAAGATAAGA TCGATAAATT TCTTAACCGC CTAAAAGGAC AAGCATCAAG CTTGATAAGT
AAAAGCTTAA TCGAAATTGC TTATAAGACT AATAGCGGTT TTATAAACGC TAGATAA
|
|---|
| Protein sequence | MQNLKSFFKA LGCGIKFINT YFKTFVLLLI VIWILVPSAN SSSKLANLER IDLKGEIFDS
SAVLEKIINA KNDSNIKGVL FVIDSPGGAF APSMELALAI KDLKIKKSVL VYASGTMASG
SYLAGVGANK ILANPASFIG SIGVIMQGAD LSGLANKLGI KEQTIQAGEF KSAGTFARAW
NENERNFLQG LIDQSYDLFT GFVAKERVLD LNKKDQWANA RVFLAAKAKE LGLIDELSNY
ENAKKELEKL ANVSNPIWKE EDKIDKFLNR LKGQASSLIS KSLIEIAYKT NSGFINAR
|
|---|
| |