Gene JJD26997_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0062 
SymbolmnmA 
ID5388690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand- 
Start bp72256 
End bp73272 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content32% 
IMG OID640861216 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001397317 
Protein GI153951834 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TAGTCGCTAT GAGCGGTGGA GTTGATAGCA CAGTCACTGC TTATAAACTT 
AAAAATTTAG GTCATGAAGT TATAGGTTGT TATATGAAGC TTCATGGCAA ACCCAATTAT 
CATGAAGAAA ATATCAAAAA AGTAGAAAAA GTTGCAAATT TTTTACAAAT TCCTTATCAT 
ATTTTAGACT TACAAGAAGA TTTTAAAAAC AAAGTTTATA TGCCTTTTGT GGATACTTAT 
AAAGAAGGCA AAACACCAAA TCCTTGTGCT TTATGTAACC GTTTTATCAA ACTTGGAAAA 
CTTTTGGAAT TTGCTAAAAA TTTAGGTTGT GAAAAACTTG CCACAGGACA TTATGCAAGA 
CTTGAAAACA ACTTAATAAA AACTGCAGTA GATGAAAGCA AGGATCAAAG CTATTTTTTA 
GCTAGTGCAG ATAAAGAAGC TTTAAAATAT CTTATTTTTC CGCTAGGCGA AATGAAAAAA 
GAAGATGTGA AAAAATTTGC TTCCACTATA GAGGTTTTAA AATCTTTTGC CACCCAAAAG 
GAAAGTTCTG AAATTTGCTT TGTTGAAGAT ACTTATGTGC AAGTTTTAGA TCAGTTTATG 
GATACAAAAA TTCCCGGAGA AGTATTAGAT AGTAGCGGAA AAGTAGTAGG CAAACATGAG 
GGCTATATGC ACTATACCAT AGGCAAAAGA AGAGGCTTTG AAGTACGTGG GACACATGAG 
CCACATTTTG TTTTAAAAAT CAATCCTAAG CAAAATCAAA TCATCGTAGG AACCAAAGAA 
GAGCTTAAAA TCAGCGAATT TAACCTAAAA AATATCAATC TTTTTATAGA TGCTAAAGAG 
CTTGATTGCG AAGTAAAAAT TCGTTATCGT TCAAAATCCA CACCTTGCAA GGTAGAAATT 
TATGAAGATA AAAGCGCAAA AATTACTCTA AAAGATCCTG TTTATGGACT TGCTAGCGGA 
CAAATGGCAG TTTTTTATAA TCATGATAAA GTCATAGCAA GCGGTTTTAT AGAATAA
 
Protein sequence
MKILVAMSGG VDSTVTAYKL KNLGHEVIGC YMKLHGKPNY HEENIKKVEK VANFLQIPYH 
ILDLQEDFKN KVYMPFVDTY KEGKTPNPCA LCNRFIKLGK LLEFAKNLGC EKLATGHYAR 
LENNLIKTAV DESKDQSYFL ASADKEALKY LIFPLGEMKK EDVKKFASTI EVLKSFATQK 
ESSEICFVED TYVQVLDQFM DTKIPGEVLD SSGKVVGKHE GYMHYTIGKR RGFEVRGTHE 
PHFVLKINPK QNQIIVGTKE ELKISEFNLK NINLFIDAKE LDCEVKIRYR SKSTPCKVEI 
YEDKSAKITL KDPVYGLASG QMAVFYNHDK VIASGFIE