| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0043 |
|---|
| Symbol | |
|---|
| ID | 5389203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | + |
|---|
| Start bp | 49333 |
|---|
| End bp | 53091 |
|---|
| Gene Length | 3759 bp |
|---|
| Protein Length | 1252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640861202 |
|---|
| Product | type II restriction-modification enzyme |
|---|
| Protein accession | YP_001397303 |
|---|
| Protein GI | 153951784 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AAGCTATAAA TGAAAAAGAA TTTTTAAATC CCTACCACCG CAAAAAGCCT
ATCTTAGAAA CAGAACTAAA CGAATTTATC AAAACTTTAA AAGACTATAA AATAAATTTA
GAAAACAATC TCAAAAACAA CGAAGATTCC CTTGTAGCAA ACGCTCTTAG CAAATTTTTT
GAAAATTTAT CTTTTCAATG CGAAGTCAAA AGCATACACA AAGGCAACAG CGGTATAGAC
TTAGCCTTAA AAAAAGATGG CCTTACCCAA GTCATCATCG AAGCAAAATT GCCTAATTCT
AGAGAATTTT TTAGCCCAAG TAGACCTAAC TGCAAGGCTT TGCATGAGTG CGTTTTATAC
TATCTTCGCG AAAGAAAAGC GTTAAATTCA TCGCTTAAGC ACATCATCAT CACGGATTTT
TATAGCTTTT TTATCTTTAA GGCGGATTTG TTTGAAGAAC TTTTTAACAA AAACAAGTAT
TTTAAAGAAG CTTTTGAAAA TTTTGAAAGC AAAAACTCGC TTTTTAAAGG CAATACCGAC
GAAATTTATA AAGAATTTGA AAAAATTTTA AATGGCGATA GCACTTTAAA AGGGCTTTTT
GTGGATTTAA AACCTATCTT AGAACAAGAT AAATTAAGCT TTAGTAAGCT TAAGCCTTTG
TTTAAAATTT TTAGCAAGGA TTGTTTGCTA AGTGAGTTTA ACCCCAACGA TGCAAATTCA
CTCAACAACG CTTTTTACAA AGAACTTTTA TACATCTTAG GGCTTTGCGA AAGTAAACAA
AACTCAAAAC TCATCATCGC AAAAAGCGAA GAAAGCAAAG AAGAGCAAGG AACTTTCTAC
ACCGCTATAA ACTCTAAACT TAAAGAAGAA AATTTTGAAA CCATCTTAAA ACTTTTGATC
TTATGGCTTA ATCGCATTTT GTTTTTAAAG CTTATAGAGT CAAATTTGGT GCGTTTTAAT
GATGATAAAA ATTTGAAATT TTTAAATTTC AAAAAAATCC CTGATTTTGA CAAGCTTAGT
GAACTTTTCT TTGAAGTTTT AGCCAAAGAA AAAAGCACAA GAAAGAAAAG CGAATTTGCC
TATCTGCCTT ATCTAAATTC TTCTTTGTTT GAAAAACAAA GCATAGAAAA CACACTTGAA
ATTTCAAGCT TAAGCAATGA CTTAAAGCTT TTTTACTATA AAAACACCGT GCTAAAAGAT
GATAAATGCA AGGCTAAAAA AGGACAAGTG GGGCTTTTGG AATACTTGTT TGAATTTTTG
GATAGCTTTG ATTTTGGTAG TGATGATGAG CAAAGCGAAA TTTTAAGCCA AAAAGAACTC
ATAAGCTCAA GCGTTTTGGG AAATGTGTTT GAAAAACTCA ATGGCTACAA AGAAGGAAGC
TTTTACACGC CAAGCTTTAT CACTTCTTAT ATGTGTAAAG AAAGCATCAC AAAAGTTGTG
CTTGATAAAT TCAACGCTCA ATTTGATCTT GATGCTAAAA ATATAAGCGA GCTAAGAAAT
TTTTTAAGAA AAGAAGACAA AAAAGCACAA AAAGAGCTTT TAAATTCCAT AAAAATTTGC
GATCCTGCGG TGGGAAGTGG GCATTTTTTG GTTTCTGCTT TAAATGTTAT GTTAAGCATT
TATGATGAGC TAAATCTTTT TGATGAAGAG TTTTACCTAG AAGTGCAAAA CGATGAAATT
CTCATCACGG GTAGAAAAGG CAAGTTTATA GAGTATAAAC GCCCAAACAC GCCTAAAGAT
AAAGCCCATC TTATCCAACA AGAACTTTTT CACACCAAAA AAGACATCAT AGAAAACAAC
CTTTTTGGCG TCGATATCAA CCCCAACTCA TGTGAGATCA CCAAGCTAAG GCTTTGGATA
GAGCTTTTAA AACATAGCTT TTATCAAAGC TTTGATGATG AGAATTATCA CGATCTTAAA
ACCCTGCCAA ATATCGATAT AAACATAAAA TGCGGAAATT CTTTGGTATC TTACTTTGAA
ACAGGCAAAA GTCTAAGCCA CTACCCTAAC ATCAAAGAAC GTATGGGCAA ATACAAACGC
ATAGTAAAAG ACTATAAAGA AGGCTTTTAT ACAGATAAAA GCCACATCAA CCAAGAGATA
AAAAATCTCA AAATTTCTTT TAAAAATTTC TGCTTTGCGG ATAAATTTAA AAAAGAAATG
AAAGGCTTTA ATGATAAATG CGAAAAATAC TCTAAAAAAT ACGGAAATTT CTTAGCCGTA
GATGATGAAA ATTTGAAATT CTTTGTTAGT GCGAATTTGA CTCTTTTTGA TTTTGATGAA
AAAGAAGCCA CAAAAGAATT TGCAAATCTT AAAAAAGAAT ACGACAATAT CTTCAACCTA
GAAAGCAATC ATCCTTTTGA ATGGCGTTTT GAATTCCCTG AAATTTTGGA CGATGATGGA
AATTTCAAAG GCTTTGATCT CATCATCGGC AATCCACCTT ATATAAAAGA AGCCGAAAAT
AAAGAACTTT TTGCTAATAC AAAAAAGCTA AGAACTTATC AAGGAAAAAT GGATATTTGG
TATCATTTTG TAGGGCGTGG ATTTGATATG TTAAAAAATA ATGGATATTT AGCATTTATC
GCTACTAATA ATTGGATTAC AAATTCAGGA GCTAAAAAAC TACGCAATAT AGTTTTAGAA
GAATCCCAAA TTTTAAGCCT TGTTGATTTT AGTTCTTTTA TGGTGTTTGA TTCTGCAAGT
ATACAAACGA TGATAATGCA ATTTCAAAAA ATAAAACCGC CTAAAAATTA CGAATTTCAT
TTTGCTAAAA TCACAACCCA AACTCCAATT TATGAAGATG CTCTAAGTCT TTTAAAAAAT
GAAAAAACCC AAAACAATGA AATTCTAAAG ATAAATTTAA CTCCAAAAAA ATTCATAGAT
AAAACTTTAA ATTTTACAAA AAGTGATTAT GAAGAACTTT TCAATAAAAT TCAAAAATAT
GGGAAATTTT ATCTTGAAGA AAGGGAAGTA GCAAATGGAA TACATCCACA TTATGATTTT
ATAAATAATA GAATTAATAG TAATCATAAT TTTGCTTTTA AAACAGGGCA GGGTATTTTT
GGTTTGAGCG AAGAGGAAAA AGAGAAACTA AAATTAACAA AATTAGAAAA TAATCTTGTA
AAACCTTATT ATGATACTCA AAATTTTTTA AAGTTCTTTT TTAAAAAAAA TAATCATCAA
TGGCTTATTT ATACAAATTC ATCTTTTAAA AATCCAAATT CTATGGATAA TTATCCGAAT
TTAAAAAAAC ATTTAGATAA ATTTCAAAAT GTTATCACTT CTGATAATAA ACCTTATGGT
TTGCACCGAG CAAGAGATGA AAAATTTTTT ACAGGAAGTC CTAGAATAGT AGCACTTAGA
AAATGCGTAG GTGAGCCTAA ATTTAGCTAT GTTGATTTTG ATTGTTATGT GTCAGCAACT
TTTTATGTGA TTAAAACTCA AAGAATTAAT GTTAAATATT TAACTGCTAT TTTAAATTCA
AAGCTTATAG CATTTTGGTT GAAACATAAA GGAAAAATGC AAGGCAATAA TTATCAAATT
GACAAAGAGC CTTTACTAAA TATCCCTATA GTAACTATAA ATTCCAAAAA TCAAAAAATA
GCTGATGAGT TTATAAATTT AGTCGATGAG ATTTTAAAAG CCAAAGAACA AGACAAAAAC
GCAAATACCC AAGAGTTAGA AAACAAAATC AATTCTTTGG TTTATAAACT TTACAACCTA
AACGAAGAAG AAATAAAAAT CATAGAAAAC AAGGAGTGA
|
|---|
| Protein sequence | MKFEAINEKE FLNPYHRKKP ILETELNEFI KTLKDYKINL ENNLKNNEDS LVANALSKFF
ENLSFQCEVK SIHKGNSGID LALKKDGLTQ VIIEAKLPNS REFFSPSRPN CKALHECVLY
YLRERKALNS SLKHIIITDF YSFFIFKADL FEELFNKNKY FKEAFENFES KNSLFKGNTD
EIYKEFEKIL NGDSTLKGLF VDLKPILEQD KLSFSKLKPL FKIFSKDCLL SEFNPNDANS
LNNAFYKELL YILGLCESKQ NSKLIIAKSE ESKEEQGTFY TAINSKLKEE NFETILKLLI
LWLNRILFLK LIESNLVRFN DDKNLKFLNF KKIPDFDKLS ELFFEVLAKE KSTRKKSEFA
YLPYLNSSLF EKQSIENTLE ISSLSNDLKL FYYKNTVLKD DKCKAKKGQV GLLEYLFEFL
DSFDFGSDDE QSEILSQKEL ISSSVLGNVF EKLNGYKEGS FYTPSFITSY MCKESITKVV
LDKFNAQFDL DAKNISELRN FLRKEDKKAQ KELLNSIKIC DPAVGSGHFL VSALNVMLSI
YDELNLFDEE FYLEVQNDEI LITGRKGKFI EYKRPNTPKD KAHLIQQELF HTKKDIIENN
LFGVDINPNS CEITKLRLWI ELLKHSFYQS FDDENYHDLK TLPNIDINIK CGNSLVSYFE
TGKSLSHYPN IKERMGKYKR IVKDYKEGFY TDKSHINQEI KNLKISFKNF CFADKFKKEM
KGFNDKCEKY SKKYGNFLAV DDENLKFFVS ANLTLFDFDE KEATKEFANL KKEYDNIFNL
ESNHPFEWRF EFPEILDDDG NFKGFDLIIG NPPYIKEAEN KELFANTKKL RTYQGKMDIW
YHFVGRGFDM LKNNGYLAFI ATNNWITNSG AKKLRNIVLE ESQILSLVDF SSFMVFDSAS
IQTMIMQFQK IKPPKNYEFH FAKITTQTPI YEDALSLLKN EKTQNNEILK INLTPKKFID
KTLNFTKSDY EELFNKIQKY GKFYLEEREV ANGIHPHYDF INNRINSNHN FAFKTGQGIF
GLSEEEKEKL KLTKLENNLV KPYYDTQNFL KFFFKKNNHQ WLIYTNSSFK NPNSMDNYPN
LKKHLDKFQN VITSDNKPYG LHRARDEKFF TGSPRIVALR KCVGEPKFSY VDFDCYVSAT
FYVIKTQRIN VKYLTAILNS KLIAFWLKHK GKMQGNNYQI DKEPLLNIPI VTINSKNQKI
ADEFINLVDE ILKAKEQDKN ANTQELENKI NSLVYKLYNL NEEEIKIIEN KE
|
|---|
| |