Gene JJD26997_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0003 
SymbolgyrB 
ID5389220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp2579 
End bp4888 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content33% 
IMG OID640861168 
ProductDNA gyrase subunit B 
Protein accessionYP_001397276 
Protein GI153951349 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA ATTACGGTGC GAGTAATATT AAAGTCCTAA AAGGCTTAGA AGCTGTTAGA 
AAACGCCCAG GTATGTATAT AGGAGATACA AATATAGGTG GACTTCATCA CATGATTTAT
GAAGTTGTGG ATAATTCTAT CGATGAAGCT ATGGCAGGAC ATTGTGATAC TATAGATGTA
GAAATCACTA CTGAAGGAAG CTGTATAGTT AGTGATAATG GTCGTGGTAT TCCTGTTGAT
ATGCACCCAA CTGAAAATAT GCCAACTTTA ACTGTTGTTT TAACTGTCCT TCATGCAGGG
GGAAAATTCG ATAAAGATAC TTATAAAGTT TCAGGCGGTT TGCACGGTGT TGGGGTTTCA
GTTGTAAATG CACTTTCTAA AAAACTTGTA GCTACAGTTG AAAGAAATAA AGAAATTTAT
CGCCAAGAAT TTTCAGAAGG TAAAGTTATC AGTGAATTTG GTGTGATAGG AAAAAGCAAA
AAAACAGGGA CAACTATAGA ATTTTGGCCT GATGATCAAA TTTTTGAAGT GACTGAATTT
GATTATGAAA TTTTAGCTAA AAGATTTCGC GAACTTGCAT ACTTAAATCC AAAAATTACT
ATAAATTTTA AAGATAACCG TGTAGGCAAA CATGAAAGTT TTCATTTTGA AGGTGGAATT
TCTCAGTTTG TTACAGACTT AAATAAAAAA GAAGCTTTAA CTAAAGCAAT TTTCTTTAGC
GTAGATGAAG AAGATGTGAA TGTTGAAGTA GCTTTGCTTT ACAATGATAC TTATAGTGAA
AATTTACTTT CTTTTGTAAA TAATATCAAA ACCCCAGATG GTGGAACACA CGAAGCTGGT
TTTAGAATGG GCTTAACTCG TGTGATAAGT AACTATATAG AAGCAAATGC AAGTGCTAGA
GAAAAGGATA ATAAAATCAC GGGCGAAGAT GTGCGTGAAG GTTTGATCGC TGTTGTGAGT
GTAAAGGTGC CTGAACCACA ATTTGAAGGA CAAACCAAAG GAAAACTTGG TTCAACTTAT
GTACGTCCTA TAGTTTCAAA AGCAAGCTTT GAGTATTTGA CTAAATATTT TGAAGAAAAT
CCTGTCGAAG CTAAAGCTAT AATGAACAAA GCCTTAATGG CAGCACGTGG TAGAGAAGCA
GCAAAAAAAG CTAGAGAATT AACGCGTAAA AAAGAAAGTT TAAGTGTAGG AACTTTACCA
GGGAAATTAG CTGATTGTCA AAGTAAAGAT CCAAGTGAAA GTGAAATTTA TCTTGTGGAA
GGGGATTCTG CAGGAGGTTC TGCAAAACAA GGTAGAGAAA GATCTTTCCA AGCTATATTG
CCTTTGCGTG GTAAAATTTT AAATGTTGAA AAAGCAAGAC TGGATAAAAT TTTAAAATCT
GAGCAAATTC AAAATATGAT TACCGCTTTT GGTTGTGGTA TAGGTGAAGA TTTTGATCTT
TCAAAACTCA GATATCATAA AATCATCATC ATGACAGATG CGGATGTTGA TGGATCGCAT
ATACAAACCT TGCTTTTAAC TTTCTTTTTC CGTTTTATGA ATGAACTTGT GGCAAATGGA
CATATTTATC TAGCACAACC GCCTTTATAT CTTTATAAAA AAGCTAAAAA GCAAATTTAT
TTAAAAGATG AAAAAGCTTT GAGCGAATAT CTGATAGAAA CGGGAATAGA AGGTTTAAAC
TATGAAGGTA TAGGAATGAA TGATTTAAAA GATTATTTAA AAATCGTTGC AGCTTATCGT
GCGATTTTAA AAGATCTTGA AAAGCGTTTT AATGTGATTT CTGTGATACG CTATATGATA
GAAAATTCAA ATTTAGTTAA AGGAAATAAT GAAGAATTAT TTAGTGTAAT CAAACAATTT
TTAGAAACAC AAGGACACAA TATCTTAAAT CATTATATCA ACGAAAATGA AATTCGAGCT
TTCGTTCAAA CTCAAAATGG CTTAGAAGAA CTTGTGATCA ATGAAGAACT TTTCACTCAT
CCACTCTATG AAGAAGCAAG TTATATTTTT GATAAGATTA AAGATAGAGG CTTGGAATTT
GATAAAGATA TTTTAGAAGT TCTTGAAGAT GTTGAAACCA ATGCTAAAAA AGGTGCTACT
ATACAACGCT ATAAAGGTTT AGGGGAAATG AATCCTGAGC AACTTTGGGA AACCACAATG
GATCCAAGCG TAAGAAGACT TTTAAAAATC ACTATTGAAG ATGCACAAAG TGCAAATGAT
ACCTTTAATC TCTTTATGGG TGATGAGGTC GAACCAAGAC GCGATTATAT CCAAGTACAC
GCTAAAGATG TAAAACATTT GGATGTGTAA
 
Protein sequence
MQENYGASNI KVLKGLEAVR KRPGMYIGDT NIGGLHHMIY EVVDNSIDEA MAGHCDTIDV 
EITTEGSCIV SDNGRGIPVD MHPTENMPTL TVVLTVLHAG GKFDKDTYKV SGGLHGVGVS
VVNALSKKLV ATVERNKEIY RQEFSEGKVI SEFGVIGKSK KTGTTIEFWP DDQIFEVTEF
DYEILAKRFR ELAYLNPKIT INFKDNRVGK HESFHFEGGI SQFVTDLNKK EALTKAIFFS
VDEEDVNVEV ALLYNDTYSE NLLSFVNNIK TPDGGTHEAG FRMGLTRVIS NYIEANASAR
EKDNKITGED VREGLIAVVS VKVPEPQFEG QTKGKLGSTY VRPIVSKASF EYLTKYFEEN
PVEAKAIMNK ALMAARGREA AKKARELTRK KESLSVGTLP GKLADCQSKD PSESEIYLVE
GDSAGGSAKQ GRERSFQAIL PLRGKILNVE KARLDKILKS EQIQNMITAF GCGIGEDFDL
SKLRYHKIII MTDADVDGSH IQTLLLTFFF RFMNELVANG HIYLAQPPLY LYKKAKKQIY
LKDEKALSEY LIETGIEGLN YEGIGMNDLK DYLKIVAAYR AILKDLEKRF NVISVIRYMI
ENSNLVKGNN EELFSVIKQF LETQGHNILN HYINENEIRA FVQTQNGLEE LVINEELFTH
PLYEEASYIF DKIKDRGLEF DKDILEVLED VETNAKKGAT IQRYKGLGEM NPEQLWETTM
DPSVRRLLKI TIEDAQSAND TFNLFMGDEV EPRRDYIQVH AKDVKHLDV