Gene YpsIP31758_B0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0123 
Symbol 
ID5384193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand
Start bp139846 
End bp140271 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content36% 
IMG OID640857232 
ProductDNA-binding protein H-NS 
Protein accessionYP_001393421 
Protein GI153930647 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.577813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG ACACTCTAAA ATTAATCAAC AACTTGCGCA GTTTACGTGC GTTTGCCAAG 
GAACTCGACA TAGACTCTTT ACGTGAGTTC CAAGAAAAAT TGAATACGGT TATTCAAGAA
AGAGAAAAAG AAGAAGAAGA AGCAAAACAA GAAGAACTTA AAAAAAGAGA GACACTTGAG
CGCTTCCGCA ATCAAATAAC TGAGGCAGGT ATTAACCCAG AAGAAGTTGC GAACTTTTTA
ACAAACACCA AAACTGTGAA TAAAGTTAAA AGTGTCCGCA AAAAACGAAC GCCTAAATAT
GAATATTTAG ACAGTAATGG AGAGGTTCGC CAATGGACAG GGCAGGGACG ACATCCTCAA
CCTATTAGCG AAGCAATTAA AAACGAAGGT AAAAAATTAG AGGACTTTTT AATAAAAAAA
AGATAA
 
Protein sequence
MSEDTLKLIN NLRSLRAFAK ELDIDSLREF QEKLNTVIQE REKEEEEAKQ EELKKRETLE 
RFRNQITEAG INPEEVANFL TNTKTVNKVK SVRKKRTPKY EYLDSNGEVR QWTGQGRHPQ
PISEAIKNEG KKLEDFLIKK R