Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0116 |
Symbol | |
ID | 5384151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | + |
Start bp | 128505 |
End bp | 129893 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640857225 |
Product | putative type IV secretion system protein IcmE/DotG |
Protein accession | YP_001393414 |
Protein GI | 153930641 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATG AAAACGATAT TGGTGAAACT ATTCCCCCAG AAAATGAAGA TCATTTTGCT CCCGATTATG AAGAAGAATA TCAACCTTCA GCCGCAGAAA TTCAGAGAAC AACCAAAGAG CGGCGTAGAG CAGAAAAAAT ACGAAATCTC AAATCTGTCT TTGGTAGCGG AGTAGGGCGC ATATCCATCA TATGTGTCGT ATTTGTTGTG GTTATCTTTC TCGCGTTAGG CATCCGTAAT ATGCGTTCTC CACAACCTCT TGGGACATCT ACAACGGTAG ATGTCCCCGC TGCGCCCCAA ATCAAAACAG ACAATAGCCC AGTAACAGAG AGCGAAGCTG CACGTCGCAG CCAGATGAAT GCAAATCAGG CGAGAGAAGC GGCCAAGCTA GGTGACTCAT TTCAGCCCTC TTTTGATACC AATATCATTG CGGATCAAAA ATCCAAACCC AACTACAACC AAAACAGCAC CGTAATTCCT GATGCTATTA ACTTCAATAA CCGAAACCAA GCATCTTCAG ATACGCAAAA TCCCAACACG GGATCACAAA GAAGTGATTC AAATAGTAAT CAAGGAAATA GTCAAAAAAA CCAAGATGGC CAACAACTAC TGAAAGAATA CACCACTGAG GTAAACAAGC GCGATAAACA TGTAGAAGAT ATGAAGAGTG AAATTATTAA GCAGTTTTCT CAGGTTCTCG ATAAAGATAC TTTAAATAAT CAAGGTTCAT ACAGCACGGT CATTTTTAAT GACACTAACA AAAGCAATAA CGACAGAAAA CCAGAAGAGT CGGTTAAAAC AGTGGCCAGC AATTCATCTG AAAAAAATGC GGCAAAGCCC CCCCTATTTA AGGCTGGTAG TACCTTATAT GCCGAGACAG GCTCTGCTGC GAATACCGAC AATGGTGTTG ATACTTTCGC TACCGTTCGT GGGGGAAAAT GGAATGGCAG TGTACTGATC GGTAAAGTCG TTCAAACAAA TAATAATATC CTTTTTCAAT ACACTCTGCT GGCCCCTCAA GACAATAGAC CATCGGTGAA AATCAACGCG ATTGCACTGA GAGAGGAAGA CGCCAGCCAA GGGATGGCTG ATGATGTAGA TCACCACATA TTGATGCGCT ATGGTTCATT AGGTGCGGCT TCATTGCTAT CTGGTTACGG TAAATCCTAT GAGAACATTG GAACAACAAC CAATAATGGA AGCACGACAA CTCAAACAAC GAATACACCC AGTAATAAGC AAATAATCGG TCAAGCCGTT GGTGAACTTG GTTCGAATTT TGCAAATGAG ATAAAACGTG GATTTGATAC ACCGACCACT TATAGCACTA AAGCAAATAC TGGCTTTGCT TTATTATTTA TGTCTGATGT ACCTGATCCT GATAAATAA
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Protein sequence | MADENDIGET IPPENEDHFA PDYEEEYQPS AAEIQRTTKE RRRAEKIRNL KSVFGSGVGR ISIICVVFVV VIFLALGIRN MRSPQPLGTS TTVDVPAAPQ IKTDNSPVTE SEAARRSQMN ANQAREAAKL GDSFQPSFDT NIIADQKSKP NYNQNSTVIP DAINFNNRNQ ASSDTQNPNT GSQRSDSNSN QGNSQKNQDG QQLLKEYTTE VNKRDKHVED MKSEIIKQFS QVLDKDTLNN QGSYSTVIFN DTNKSNNDRK PEESVKTVAS NSSEKNAAKP PLFKAGSTLY AETGSAANTD NGVDTFATVR GGKWNGSVLI GKVVQTNNNI LFQYTLLAPQ DNRPSVKINA IALREEDASQ GMADDVDHHI LMRYGSLGAA SLLSGYGKSY ENIGTTTNNG STTTQTTNTP SNKQIIGQAV GELGSNFANE IKRGFDTPTT YSTKANTGFA LLFMSDVPDP DK
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