Gene YpsIP31758_B0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_B0115 
Symbol 
ID5384158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009705 
Strand+ 
Start bp127367 
End bp128452 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content45% 
IMG OID640857224 
Productputative type IV secretion system protein IcmK/DotH 
Protein accessionYP_001393413 
Protein GI153930659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA GATATAAATT AATTACCCTA ATAATACTCA CAGCAACAAC TGCCAATACC 
AGTGCTGCGC AGCAAAAACC AACAACGACA ATAACACCCG CGCAGTCGGC AAATGTTGCC 
TCACAAAAAG GGGAACCTTC AACCGCACAA GCTCAGTCTG ATAGCACTGA CTCAAACAGT 
CATGTCGATG ATAATTCAAT TCAACCCAAA GATAGGCCAC CAGAAAGCGG TTTAGGCTTG 
CAAGTTGCAC CACCTCAAGT CGTATATCCG GCCTCTCAAC AAATTGTCGA AGAGACCCTG 
ACCGACCTTG AAAGCCTTCA GTTAACACCT GAACAGAGCA ACAGGTTGAA AGAGATCAAC 
TTAGAAAGGA GCAGACAGAA ATCGTCTCCT TATATATCAC CTCCTAATCC TGTAACCAGA 
ACATTGTTAG TCAACTTAAA TGCAGGTGTA ACCCCCCCGA CTATACGGCT CGCAACAGGT 
CAACTATCAA CAATCGTCTT TTCGGACATG AATGGGCAAG CATGGAACAT CAATCGTGTT 
TCTATTAACT GCGTTCAATT CAACAGTGCA TTGGGATGTG AAAAAGAGAA GGGGACAGAA 
CAAACCAACA TCATCACCAT CGAACCTAAA CAGCCCACTG CTTATGGCAA CATCACTGTC 
ACATTGAATG GCTTATCAAC TCCGGTCATT TTCATTCTGA CCAGTGGGCA AAAAGATGTC 
GATATGCGCG TTGATGCAAA ACTGACTGGC CATAATCCTG ACGCAGAGCA ATCAATATCC 
CTCACTGGCA TGCCATCCAT TGACAGCGAA ATGACATCTT TCCTTGATGG TGTCCCACCG 
AAGAGTGCCA AAAGGTTAAA AGTGACAGGA CTGGATGACG TTGAAGCATG GGCATACAAC 
GATGCCATGT ACGTTCGCGC TAACGCAAAT GCTCAGTATC CTGCCTACAT TAGCGCCGGA 
CGAAGCACTA CAGGCATGTC TATATACAAA TACGCTCAAA CCTACAGCAA CGTCACATTC 
ACTACAGGCG GTAGAGCCGT AACAGTATCA ATTGAAAACA GTGATACAGC TTCTTCAGAT 
AAATAA
 
Protein sequence
MKFRYKLITL IILTATTANT SAAQQKPTTT ITPAQSANVA SQKGEPSTAQ AQSDSTDSNS 
HVDDNSIQPK DRPPESGLGL QVAPPQVVYP ASQQIVEETL TDLESLQLTP EQSNRLKEIN 
LERSRQKSSP YISPPNPVTR TLLVNLNAGV TPPTIRLATG QLSTIVFSDM NGQAWNINRV 
SINCVQFNSA LGCEKEKGTE QTNIITIEPK QPTAYGNITV TLNGLSTPVI FILTSGQKDV 
DMRVDAKLTG HNPDAEQSIS LTGMPSIDSE MTSFLDGVPP KSAKRLKVTG LDDVEAWAYN 
DAMYVRANAN AQYPAYISAG RSTTGMSIYK YAQTYSNVTF TTGGRAVTVS IENSDTASSD 
K