Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0035 |
Symbol | |
ID | 5384179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | + |
Start bp | 42851 |
End bp | 43351 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640857144 |
Product | hypothetical protein |
Protein accession | YP_001393333 |
Protein GI | 153930691 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000000178342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACTAT TTGAAAACGC TTCATCTGAC TTAAATAAAA AACTCGCGCA TCAAGTCTTA ATCGAAAACC AAATTAAAAG TTACACGAAT CTCCTGACCT TTTTTGAACA GCGATTAAAT GTTCATGGTT ATGAGTTCGC ATACCGCTCC AAAGGCATCA CTATTATTGA TTTACCCCCT GAGATTTACG CTACTGTTGC TACCGAGGTA TTTGGCGAGT TTTTAAAAGA TGGCAATAAC CAATCTATCT TCCACTCGTT CTTTCAGGTT AAAAAGTCTA TCTTTCGTTT ACGGGCAGAT GAATTTCTTG ATGGCATCAT GCGGGTATTA AGTCGTTCTG CCATTGTCAT TATTGAATAT GATAAGCCAG AAGGGGTGAC ATACCAAGAT GAAATCTCCG ATGAAGAGTG TTCACTAATG AATAAGCACA TGTTATCTGC TTCAACTGAG GGTGGGGGGG ACAGCACGGG AACTCATAGC TCATTATTAA TGAAGTATTA A
|
Protein sequence | MALFENASSD LNKKLAHQVL IENQIKSYTN LLTFFEQRLN VHGYEFAYRS KGITIIDLPP EIYATVATEV FGEFLKDGNN QSIFHSFFQV KKSIFRLRAD EFLDGIMRVL SRSAIVIIEY DKPEGVTYQD EISDEECSLM NKHMLSASTE GGGDSTGTHS SLLMKY
|
| |