Gene YpsIP31758_B0034 details

Gene Information

• Locus tag: YpsIP31758_B0034
• ID: 5384278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009705
• Strand: +
• Start bp: 40729
• End bp: 42777
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640857143
• Product: putative DNA replication primase
• Protein accession: YP_001393332
• Protein GI: 153930644
• COG category: [L] Replication, recombination and repair
• COG ID: [COG4227] Antirestriction protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.000123462
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAC GTAATGCACG ACAAGAACTA ACCGATAAAC CTAAACGTAA TTCACGTCAA 
GAATTGACCG ATAAACTTAT TGAAGCTTTA GAAAGCCATG ATCAATCTCC TTGGCGCAAT 
CATTGGAAAA GTGTGGCGAT GCGCCCCTAT AATTATAAGT CAGGGAAAGC ATACCGAGGC 
GGCAATGTAT TAAATCTGAT TTTTGACCAA TCCGCAAAAG ACTCTGTTGA TCCACGTTGG 
ATGACTTTCG CTCAAGCAAG TAAAGCGGGA TTTAAAATTA AAAGAGGATC AACCGCCTCA 
CTGATTGAAT ATTGGAATTT TGTAGAACCA GAAGCAGAAG CAAAACCGGA AACGGGCAAT 
GAGAATGATG GTGATGACAC ACCAAGAATG TTTGTCCGAT ATTACACCTT GTTCAATGGG 
CAAGATATCG AAGGCTTACC CGAAATGCAG TATGTCAAAG CCACATTCCC TCCGAACGAA 
TTGGCAGAGC GGTTGGTCAA GGCCACGGGT GCAAAGCTTG AACATCGTAC TGTAACCGCT 
ACTAGGTCTC AGGTTTTAGA AGATGCGGCA TTCTTCTCAC ACCGTAACGA TACGATTGTC 
TTGCCGCCGC TGGGCGCGTT CCACAGCCAG CATGACTATT ACGCAACACT ACTTCATGAA 
TTATGCCATT GGACAGGTTT TGAAGACCGC CTTAACCGTA GAGGTAAAAG CGAAGAGATA 
GATCCAGAGT CACCAGAGTA TGCCCGTGAA GAGTTGAGAG CAGAGCTTGG AGCTTATTTT 
CTGACCACTA TGTTGGGTAT TGAAGGAGAA GTACAGAATC ACGCCAAATA CACGGGCCAC 
TATTTAGCGC TACTGAAAAA TGATAAAAAC GAAATCTTCA AAGCAGCCAG AGATGTTGAC 
CACATAATAG AGCATCTATT TAGCTACGAT CCTGAATTAC TCAACATCAT TGAAGGCAAC 
ACGATTGCTG AAAATGTGAT GGCTGAAGAG GCAAACCAAA ATCAAGACCT AGGCTTACCC 
AACTTTATAC CCCCTGCTGA CAAAGTACAG GTCGGTGCTC CCCCGTTCAA CATTGTCAAT 
TTTGACACAT GGGAGCATGG CGCACTTCCC GTCACCGTCA ATGACGTTGT GACCTTTGCC 
AGCCCAGACA GTGAGTATTA TGGTCAGCGC TTCGCGATCG CCTCTTATGG GTCAGACAAC 
ACACAGGCAA AGTTAATTCA AATTGACATT AATGACTGTC TTGCGACTCA CGGGATCGAT 
GAAAAAATTG ATTATCCTGT TGCTGATCTA GCCCTTTTCA TCTCACTACC TGATGAGGTT 
CGATTTGAGG TACTGGCAAA AGAGAAATGT GCTGATATCA ACTTGCCCGA ATCATATCTA 
AAGCGAATTC TTGCTAGTCA GGCAGAACTG GAATCCTACC TAAAAGAAAA TACCGAACAT 
GCGGCTTCTG CCGATAACGT TTCCGCTTTT GTCATGAAAG AAGCTAAACG TTGGCAATCT 
GCCAAGCCGT TCCATGATGA ATGGCGTAAT TTTGAAAAAC AGTTTATCTC TAAATTAGAT 
AAGAAATGGC ATATAGAGAA TGATGTCGTG CTCCAAATTT TGGCGACAGT AAATGAATTA 
AAAACAAACG TATCCACTTT ATGTGATGAA AGTTCTACCG TGGCCATAAG TGAACAGGCC 
CGATTTGCCA ATCTCAAATC GGCGTGGGCA TTAATGTACG GTACACAGGG GAATTACTTT 
GATCCTGATC GCGATGTTTT ATTAGATGAA CGTTTCGCTG AAATAATCGC ACCCTTCATG 
GTCGCCCCTT CACCCGACCC TGTACCCGTA TTTGATTCCG CACCCGTACT AAAACCAGAA 
CCAGAGTCTG TTATTGTCGA TCATGGCACA GTGGCGGACA ACACCGACCG ATACTCATCG 
GACGATGAAG ACGATATTGA TTTCAATGGG GATCGGCAGA GTCCCCCTCA AAACGCCCCT 
AAAGCAGCAC TAGAGATTGA TGAAGACGAA CTAACCCCAC TGGGCAACTC AAGTAGCTTA 
GAGCCGTAA 

 

Protein sequence

MAKRNARQEL TDKPKRNSRQ ELTDKLIEAL ESHDQSPWRN HWKSVAMRPY NYKSGKAYRG 
GNVLNLIFDQ SAKDSVDPRW MTFAQASKAG FKIKRGSTAS LIEYWNFVEP EAEAKPETGN 
ENDGDDTPRM FVRYYTLFNG QDIEGLPEMQ YVKATFPPNE LAERLVKATG AKLEHRTVTA 
TRSQVLEDAA FFSHRNDTIV LPPLGAFHSQ HDYYATLLHE LCHWTGFEDR LNRRGKSEEI 
DPESPEYARE ELRAELGAYF LTTMLGIEGE VQNHAKYTGH YLALLKNDKN EIFKAARDVD 
HIIEHLFSYD PELLNIIEGN TIAENVMAEE ANQNQDLGLP NFIPPADKVQ VGAPPFNIVN 
FDTWEHGALP VTVNDVVTFA SPDSEYYGQR FAIASYGSDN TQAKLIQIDI NDCLATHGID 
EKIDYPVADL ALFISLPDEV RFEVLAKEKC ADINLPESYL KRILASQAEL ESYLKENTEH 
AASADNVSAF VMKEAKRWQS AKPFHDEWRN FEKQFISKLD KKWHIENDVV LQILATVNEL 
KTNVSTLCDE SSTVAISEQA RFANLKSAWA LMYGTQGNYF DPDRDVLLDE RFAEIIAPFM 
VAPSPDPVPV FDSAPVLKPE PESVIVDHGT VADNTDRYSS DDEDDIDFNG DRQSPPQNAP 
KAALEIDEDE LTPLGNSSSL EP