| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0020 |
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| Symbol | |
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| ID | 5384199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 26018 |
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| End bp | 26974 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640857129 |
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| Product | type IV secretion system protein PilT |
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| Protein accession | YP_001393318 |
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| Protein GI | 153930637 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTTTTA GGTTGAGAAA AATGCTCTTA AAAGATTATG AGTTTGTTGA TCTCTATATT
GGCGTTGATT TTATCGACGT AAGCAACGGA GATGGCAGAA AAAGTGCACC TGAATGGCTG
AAGAGTGAAA TTAACCTAGT TAGAGAAAAA TGCGAGAACT TAGAAAAACA GATTGGTTTT
GTCGAGTTTT CTTTATTGCA TGATGACGTG TTATATCGTG TCACCACAAT AAATGACTTA
TCGATGAACA GCATTTTTAT TCTGCGTAAG TCGATGGCCG AGATCCGAGA ACTCGATAGT
ATCAATCTTC CCGTGCCAAT TATGGAATTA ATTAATACCA GAAATATGGA TGGATTAATT
TTAATTGCAG GCAAAATGCG AAACGGCAAG ACCACGACAG CATCCTCGCT GATGAAGTAC
CGGCTTGAAA AATTCGGAGG GGTGGGAGTT GCAATCGAAG ATCCTCCTGA AACGCGGTTA
CACGGCTTAC ATGGAACAGG GCGTTGTCTA CAAATAGCAG CATCGCGATT AAAAGGCGGC
TACAAAGAAC AAATTATCGT TGCGATGAGA ACTGGTGCCG ATCTGATGTT TATCGGTGAA
ATTCGTGATA CAGCAACCGC TGTTGAAGCT GTGAATGCGT CAATCAATGG TCACATGATT
ATATCGACTA TCCATGCTGG TAGCATTCAG GAAGCCATTG AGAAACTTCA CTCCTTGTGT
GACAAAGAAA CTAAACAGGT TGTCGCCGAT GGAATAAAAA TCGTCATCTA TCAAGAAATC
ATCGTTGTTC GTGAAAATGG AATTGGTGAA GTCATTGGCA AACGACTTGA GCTGAGCGCT
TTTATTGTTG ATGAAACAAC ACGATTTCTC ATTCGTGATG GTGACTTGTC TGCTATTAAC
CAACAAGTAT TCCACCAATC AACAAAACAC CAGTGGGATT CGAGCGGTAC AAATTAA
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| Protein sequence | MFFRLRKMLL KDYEFVDLYI GVDFIDVSNG DGRKSAPEWL KSEINLVREK CENLEKQIGF
VEFSLLHDDV LYRVTTINDL SMNSIFILRK SMAEIRELDS INLPVPIMEL INTRNMDGLI
LIAGKMRNGK TTTASSLMKY RLEKFGGVGV AIEDPPETRL HGLHGTGRCL QIAASRLKGG
YKEQIIVAMR TGADLMFIGE IRDTATAVEA VNASINGHMI ISTIHAGSIQ EAIEKLHSLC
DKETKQVVAD GIKIVIYQEI IVVRENGIGE VIGKRLELSA FIVDETTRFL IRDGDLSAIN
QQVFHQSTKH QWDSSGTN
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