Gene YpsIP31758_B0016 details

Gene Information

• Locus tag: YpsIP31758_B0016
• Symbol: pilP3
• ID: 5384220
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009705
• Strand: +
• Start bp: 22238
• End bp: 22774
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640857125
• Product: type IV pilus biogenesis protein PilP
• Protein accession: YP_001393314
• Protein GI: 153930665
• TIGRFAM ID: [TIGR03021] type IV pilus biogenesis protein PilP

Plasmid Coverage information

• Num covering plasmid clones: 70
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAACT TTAAAGAAAT TAAAAAATAT AAGATAATCT TGTTGTCTTT ATTATTGGTC 
TCGGTGAATA CTCCCTTCGC TTGCGCTGAA ACAACTCCGA TGGACGAAAT ACAGAAAATT 
AATACTGATA CAAGCATTTT AAGAGCGAAA GTGATACAAG CGCAATTAGA AAATGAGTTA 
GAAATAGCGA AACGTGGGGG CAGTGTCACC AACCAAAACT ATAATAATAC ACAGCCTATG 
ATGCCACCTA CGGCATCAAT TCCACCTATG CCACTGGACA TAGCCAATAC GCGACAGAAA 
TTGAATTACA GCGATAATGA TGCTTTGCCC TCGTTCGTTT CTGTATTTGG TTCTAATGGA 
CGAAATGTTG GCACATTTCG CTTAGCCGGA GGACGGACTG TTGAAGCCCG TGTTGGAGAT 
ACCTTACCAG ACGACTACAC CGTAAAATCA GTGTCATTAC TTAAGGCACA ATTAGTTAAA 
AACGGCAAAA TTTACAACAT TCAACGTTCG TCTTCTTCTG CTATTAACGG ACGTTAA 

 

Protein sequence

MLNFKEIKKY KIILLSLLLV SVNTPFACAE TTPMDEIQKI NTDTSILRAK VIQAQLENEL 
EIAKRGGSVT NQNYNNTQPM MPPTASIPPM PLDIANTRQK LNYSDNDALP SFVSVFGSNG 
RNVGTFRLAG GRTVEARVGD TLPDDYTVKS VSLLKAQLVK NGKIYNIQRS SSSAINGR