| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0014 |
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| Symbol | |
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| ID | 5384251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 18931 |
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| End bp | 20625 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640857123 |
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| Product | PilN family type IV pilus biogenesis protein |
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| Protein accession | YP_001393312 |
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| Protein GI | 153930668 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT TTAAAAGACT TTCACTTGCG GTAATGATCT CTTCCACCCT GTCAGGTTGT
GCGTATAAAA ATATTAATGA CACGATGAAG AAAGCCAGTA ATGACAGCGA TGAAGCCACT
GCAATGTTAT CAACACTGAA AGAAACCAAA TCCGCTAATG ATACAAACTT TCAAATTAAG
TCGGGCGTCT GGGTTGACAC GAAACCCATC GATATAAAAC CGATTGCCGA CCTACCTCGG
TCACTGAATT GCGATATAAC CTTCGGTTCT GACCGCGAAG TGGGCTTACT CGAATTTAGC
CAACGCATTA CCAAAGATTG TGGTGTCGTA GTCCGTATCA CCCCCGATGC ATTAGCCGTT
GTATCGGGCG GCGTCATGGG GCCAGCAACG AATAACTCCG TTATTCCTGC ACCACCAGAG
ATCCCGAATG GTGTGACACT GCCATCTGTT CCTCCGAGTG TGGGCCAAAA CCCAGCAATG
AATAACAGTT ATAGCAGCAG CGGCACTATG GCCTCAGCCA GCCGTGGGCA ACAGCTTAAC
TTTGAAGGGA AACTTAAAGG GCTGCTTGAG GTTTACACGG CTGGTCTTGG GCTGTCTTAC
CGTACTGATG AAACGGAAGC AATCACCATA TTCTATCTAG ACACTCAAAC CTTTACTGTC
ATGGCCATGC CATCGGCGAC GGAATCATCA AATACGGTTA AATCAGGAAC CAATACGTCA
TCTGGGGTAT CAGGGGCTAA TGGCACATCA TCAGGGATGA GTGGCGACTC TACTTCCAAC
TCCACGACAT CAGTAACGAT TAAAAATGAT TTACTGAGAG ACATTGAAAA AAACCTCCGC
TCGATGCTCA CCCCCAACGT CGGCCGCTTA TCGATGTCAC CTTCGACAGG CAATGTGACG
ATTACCGACA CCCCTGAAGT ACTGAAACGA GTCAAAACCT TTATTGCCAG CGAAAATATC
AAAATTACAC AACAGGTTCT GCTCAATGTA AAAATACTGT CCGTGTCTCT CAAGGATCTT
GATGATCTGG GGTTGGACTG GAACGTCATT TACAAGTCAA TGTCAGGGAA ATGGGGCATA
AATCTGAAAA ACGCGTTTTC AGATCTGGCA ACCAATGCCA CATCAGGCTC TATTTCCATT
CTTGACCCCA ATAGCCAGTT TGATGGCACC ACAATGCTCA TCAAAGCGCT ATCTGAACAA
GGCAAAGTCT CTGTTGTCAC CAGCCCATCA ATTACCACAT TGAATTTGCA ACCCGCTCCC
GTTCAAGTCT CTCGTCAAAC GAGCTATCTG GCTTCACGAT CAACCACGTC AACCACCAAT
GCGGGAACTG AAACCAGCTT GACACCCGGC ACTGTGACTA CCGGTTTCAA TATGTCACTA
CTGCCTGCAA TTATCCCTGA CACGCGTGAC CTACTACTTC AATACAACAT CAATTTAAGT
TCGCTGATTC AAATTCGTAA AATTGGCACA GAAAATAATC AAATTGAAAT GCCGGATACT
GACAGCCGTA TATTCAGCCA GCAGGTCAAA CTCCGCAGCG GAGAGACCTT AGTTATTTCA
GGTTTTGAGC AAACGGCAGA CAACGCAAAT AAAAGTGGTG TCGGTGATGC AGAATTCTGG
GGTTTTGGTG GAGCCAGAAG CCGAAACTCA ACTCGCGATA TTATCGTGGT CATTATCACT
CCGGTACTGC TATAA
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| Protein sequence | MKIFKRLSLA VMISSTLSGC AYKNINDTMK KASNDSDEAT AMLSTLKETK SANDTNFQIK
SGVWVDTKPI DIKPIADLPR SLNCDITFGS DREVGLLEFS QRITKDCGVV VRITPDALAV
VSGGVMGPAT NNSVIPAPPE IPNGVTLPSV PPSVGQNPAM NNSYSSSGTM ASASRGQQLN
FEGKLKGLLE VYTAGLGLSY RTDETEAITI FYLDTQTFTV MAMPSATESS NTVKSGTNTS
SGVSGANGTS SGMSGDSTSN STTSVTIKND LLRDIEKNLR SMLTPNVGRL SMSPSTGNVT
ITDTPEVLKR VKTFIASENI KITQQVLLNV KILSVSLKDL DDLGLDWNVI YKSMSGKWGI
NLKNAFSDLA TNATSGSISI LDPNSQFDGT TMLIKALSEQ GKVSVVTSPS ITTLNLQPAP
VQVSRQTSYL ASRSTTSTTN AGTETSLTPG TVTTGFNMSL LPAIIPDTRD LLLQYNINLS
SLIQIRKIGT ENNQIEMPDT DSRIFSQQVK LRSGETLVIS GFEQTADNAN KSGVGDAEFW
GFGGARSRNS TRDIIVVIIT PVLL
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