Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_B0012 |
Symbol | |
ID | 5384254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009705 |
Strand | + |
Start bp | 17153 |
End bp | 17611 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640857121 |
Product | type IV pilus biogenesis protein PilM |
Protein accession | YP_001393310 |
Protein GI | 153930667 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATATG GCTATTTAGT GATGATTTTA GTATTTGGTA TTATGATGAA TTCAGATTCA TTTCTCGCTG AGAACACACA AAGTAATACT GAAACCCAAG AACGCTTGGA ACTGGACGTG CTATCGACAC AAATTTTTAT TTATCGAGGG TCTGTGAGGA ATTATCTAGA GAGTCACCCA ACTCAAGAGG GTGGAGTGGC TGATACAGCA TTATCATTGC CTAGCGGATT TATTAAAGAC ACTCGAATTA AAAATCTATT TAATGCGGGA ACTGCTTATG TGTACTGTAA TGCGGAGTGT CCTACAGGGC TGGAAAGTGC GCTAAGTGAG AAGTCAGATG GTTCACTGAT GGTAGGAAGA AAGCAAAACG GTTATTTCTA TGTAAAAGGG GAAGCCAATA AAGACATTCT CTTGTCAACT AACATAGCAA ATGGCGATGT GGTCTATATC GTTAAATAA
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Protein sequence | MGYGYLVMIL VFGIMMNSDS FLAENTQSNT ETQERLELDV LSTQIFIYRG SVRNYLESHP TQEGGVADTA LSLPSGFIKD TRIKNLFNAG TAYVYCNAEC PTGLESALSE KSDGSLMVGR KQNGYFYVKG EANKDILLST NIANGDVVYI VK
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