| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0003 |
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| Symbol | |
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| ID | 5384256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 1964 |
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| End bp | 8365 |
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| Gene Length | 6402 bp |
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| Protein Length | 2133 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640857112 |
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| Product | helicase. putatve |
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| Protein accession | YP_001393301 |
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| Protein GI | 153930732 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTTA ATAAAGAACA AAAAACGAAA GCAATAGGGA TAATCACTAA ATCTCAGTCA
ATCATGTTGT CAGATAAAAT TCAAACAGAC ACCCAAAGTG ATCAAAATAT TTACTATTCA
GCCAGACCTA TTTGGTTTGG CTTATTGGAC TCATTAAGAA AAGAAGGGAT CGTTGATAAT
GATAAAAACA CCACTCAAGT GGAAAATATT ATTGTCACAA ACAACGCTAT TCCCTTTGAG
TTGATTGAAC GTAATGAGTT GTCGCCAGTT AGCTCTGGAT CACTGATTTC ATTAGCGAAT
GAAATTTTAG AAAATGAAGC CAACTTCTTA TTGTATAGTC CAATGAGTAA AGCGGTTACT
GTTATTTGGC GTCCCGCTAA GCAGTATTGT CTAGACAAAT TCATATGCAA AGATGTGGGT
GAAGCCATAC AGGATGAAAA CATTGTTAAT GTCTATCTTA CAGATGATGA AGTCGCTAAC
CGCCTGTTAA CCTCAATATC TTGGGGATAT ACCAAAGATC TCACTCGCAC AAAGATTATA
AACAGATATA TCACCGACGA CTTTGATAGC TGCTTACATT TGGCTGAGCT AAGCAACATA
ATAGAGGGCA TTCATCCTGA ATTCAGTAAA ACAGGTGACG TTAAACAGAA CATAGAGCGT
TTTCTTCAAC GACAGACCGA CACTGATCCA AGACGTGCAG CGCGAAGTGC CAAATACTGG
GTAGAGAAAT ATACAGGTTC TGCCCCTTTC ACCTTATCGC CGAATCTTGC CAAGCAGTAT
GGCAACGAGT TACTTACTCT GGTGGCTCAA TATGACCAAG AGAAGCAAGC CGAAACCACA
AACACTCAGA ACAATCCAAA TAAGCTAAAA AGGTCAACCA AATGGGTTGA TTTGGCAACT
CATAATCTCT ATTTAGGGGA ACAGCACTTC TCTGATAACA GAGATCGCCT AATGCTGGTT
GACCTCGATA ACTTCATCAC TAAGAACAAG CGGCTAGAAG AGCTAAAAAA CATTGGTTTT
ATCCCCCTCG CTGGTACACC TCGATTTGAA GGGGGCATTT ACTACCTAAC AAGTGAAGAT
CAGCGTCTCA AACCCTCATC ACTTGCAGCG GCACTGGGCA TCAACAGATG TCCTGTCATT
GAAATGGATA TAGATGACAT TCCGAAAATG TTCAAAGCCA AAGTATTTGA GCGCTTCGAA
ATTAACGTTA ATGCGCTATC TCTAAGTTCT GAGTTATTAG GCACCAATAG CGATGGACAT
GAGGTATTCA ACTCGCCAAC GGGACGCTTT ATTCGGCAAA GCAAATTTGA CGTTATTCTA
GAAGGCACAG ATGCAGCCGA TAACGTCGGT CATACCTCAT TTTTACGCGC CCGATCCAAT
CAAGACCTGC GATTGTGCGC TGAACTGTTT GTTAAGGACA TATTCAACGG TGGCCGCAAA
CAGTGGACTG ATGTCACCAA ATTCGCTCAA GTCATTTTTC CCGACGGCCA TGCTGATGAC
CGCCAGCTAC ACCAATTACA GGAAGCAATT GAAGCGGCAT CATATCGTAC TTTTGCTGCT
CGCTCGGTTG ATGTTAGCGA TCAGGACGCA TTCGATCTGG CCAAAAACGT CTACTACGGC
CTCCCTGTTG CCCGAATGCG AACGGGTGAA AGTCTCTCTC TACAACAATA TTCAACAACA
CTTCCCCTCA GCGTGGTCGC GCAACGCTTA GTCATCGGAA AAGACCATAC TGAAGGCAAA
TCACTCATCG AACCTACCGC AGGTAATGGT GGCTTACTCA ACCGCATTGG CCCCAATATC
AAGAAATACC TAATGGAACT CGATCCTAAT CGGATTGATG CGCTAAAAGA GGCATTCCCA
GATGCAATCA TCGCGCAGGG GGATGCCACA TTGATCCCCT TCAGCCAAAC CTTTGACCTG
CAAAAAGGGG TTGATTATGT CATCACCAAT CCCCCGTTTG GCAGAATGGA TACACCCAAG
TCTTTTGACG TCCTACCGAA CGTCAGGCGA CTGGATCACT ACATTGCGTT ACAGGCATTA
AAAGCGCGTA AAAATAATGG CCGTGCGGTA CTGATCCTTG GGGCAGATAA AAACCAATCT
GATGGAACAC TCAGTGGTGG CTCTAAAAAC CTCATGTACT ACCTGAATGA CTTCTATCAG
GTCGAAGGGG CCGTAGAATT AGACGGGCGG CTCTATGCGC GTCAGGGAGC GGCATTCAAT
ATCCGTGTCG TTGTGGTCGG ACAAAAAAGA GACCAACCAA TACAAGCTGT GATACCCGAA
AAACTACCGG TACTCACGAC TTACGATGAA TTGTGGGATT GGTCAGAAGG GCTGATAACA
CGTTATGAAG CCGATCATCA CATACCCACT CTTCAGCAGA ATAACGAGGC TGAACCTGAA
CTGCCTGTGC CACGACTCAA TGTGCCACAA CCGCAGGGTC AACCCAAAGC CTCAGCAGAG
CCGAAAGCTA AAGCCCCTGC AAAAAGCCGA GCTAAGCGAG TAACGGCGCA TTCAGACTCA
GCTAACTCAC CGGATTCAGA TACTCCTATT ACGGGGGAAC CAGCACAAAT TAGTGATTCA
TCTCTAGGAC ACCAAGTTAC CACTAATGAA CCACCAAAAA CGGACAGTAC AGATATCCAA
AAGGCCAAGA ATCCGCAAAA AACCGTGGTG CGAAACATCA ATGAATTTCA GGCTCCCTAT
CAGGCCGCAA GCAAATTAGG CACAGCCACG GCGATGATCC CCATTAACAT GAGTGCAGCA
ACCTATTCTG CCCTTAACCG TTTAGAGATG CGCTATGGTT CAGTGGATGA TTATGTTTCA
GACAAATTAA AATACCGTAA AGAAGATCTG TCATCCTATT TCAGCCCTGA ACAGATAGAC
GCTATCGCCT TGGGAATTTC AGCGGTTGAG AACAACAGAG GCATGATCAA TGCTGACCAG
ACAGGGATTG GCAAAGGCCG ATTTGTGGCC GCAATGCTAC GCTATGCACG ATTGAATAAT
AAGCTGCCAA TATTCTTATC AGTCAAACCT GAACTATTCA CCGATATCTT CAGAGATATC
AGTGATATTA ATAGTATGGA ACTATTCAAA AAACCGTTTA TTTTCAATAA TACGGTCAAT
GTCAAAGTGT ATGGTTCCGA AAGCGAAGAG CTATTTCCCG CGACATCTAA AAAAGAATTA
AATGATGCCC TTCTCAAAGG CGAAGTTGAA AACACCGTTG ATTTAGTAAT GTCTACCTAC
TCACAATTTG GCCGAGAACG CAGTAAAAAT AAAAAAGCAG GGTTACTACT TTCACTAGCC
AATAAAGATG CCATGATCAT CTTGGATGAG TCCCACATCG CGGCTGGATC GTCCAACACA
GCAGATATTG TGAGTGATGC AGTGCTTAAT TCAGGCAGTG CGCTCTATGC ATCATCAACC
CCGATCAAAG GCTGCTCTAA CTTCAGTCTC TACAGTAAGT GCTTCCCATC CTCAGTCGAT
ATCCTCAACT TATCAGAAAC CCTCACCCTT GGCGGGGAGG GCTTACAAGA GGCTATCTCT
GCGAACATGG CTCAGGATGG ATCAATTAGT CGTCGGGAAC ACGATTATTC AAAATTGACC
TTTGAAACCC GCTATCCCTC ACCGGAAAAT GAACAGCGCA ACCGTGACTT AATGGATAAA
GTCGCAGACA TTTTATCAGA AATGGCATAC CTGTCTGGTG ATGTGAATTC AATTGTTAAA
TCAATTAATA CTGATGCTAA ACATGAGTGG GAGTCCATCC CTGAAGCATT ACGAAGTGGC
AACCGGATGG GGGCCAGTAG TATGAACTTC TCGTCTCGGC TCTATAACAT CTCTCGACAA
TTTATCTTAG GGATAAAAAC AGAAGAGACC GCCACCGCTG CGCTGGAGGC ACTCGCTGCG
GGGATGAAGC CCGTGGTTGC CGTGGAAAAT ACAGGTGAAT CGTTATTACG GCAGTTAATT
GCCAGCAAAA CGGGTTCAGA TGAATTATCT GATGAACTTG AAACACTCGA TGAGAAGGGC
GCACTAACAC CCGATGAAGC CCTGCGGCGG CAACTGCTGG TTGACTCAAT GGCCAGTGCG
AGTAAAGAGA TACTCTTTGA ACAAAGTCCT CAATTCAGAG ATCTCTTGGA AATAGTACTG
GATAGACTGG CCAAAATCAC GATCCGTGGC CGTTATGGTG ATGTGACTAC GCAAAATGCG
GCTGAAGATC CTGAATATTT TGAAAAACAG GAAGATGTGC GCGAAAAAAT ACGCAATTTC
CCTGATCTAT CACTGATGCC GATCGATGAG TTTAAGCATA GCTTACAAAG CCAAGGCTTC
AGAGTTGCGG AAGTCTCAGG GCGTAAAGTA TCGCTGATCC CCGTAGTGAT AAATAATCAG
TCAATGTGGC GTGTTTCATT CCATGAAAAA GCCGATGCGG TATCAAATGT TGCTGGATTC
CAGAATGGCA AATATGACGC TATCGTCATC ACTCGTTCTG GATCAACGGG CATATCCCTT
CACTCATCAA ATCGGTTTGC CGATTCTGAT ATCCGCCAAC GCTATTTTAT TGTGCAACAA
AAAGCCGCCA ACATTTCAGA GTTTTTACAG TGGATGGGGC GGGTAAACAG AAAAGATCAG
GTTATCCCGC CGATTATCGT GAATATTGAA AGTGGCCTGC CTGCTGAAGC AAGACAGACC
ATGATGCACA ACAGCAAATT ACGCAAATTA TCCGCGAATA CAACCAGTAA CAGGGAAAAT
GAAAACCTTG AAGGCGACGA AGATCTCCTC AATTCTGTCG GCGACAAGAT TGCTTTAGAG
TATTTGACTG AAAATCCCGA TATTGCTGAC GCCTTGGACA TCGCGCTGCC TAAAGCAGGG
GAATCCCCTA GTTCCTCTGC TTCCGAAAAC CCATACATCA ACAAATTGAT GGGCCGCTTG
ATGATGATCC CTGTCAATCA GCAAGAGACG GTATTAAAAC TGCTATCGGA GCGCTTCATT
GAACGAATAG AACAACTGGA ACAGGAAGGC ATCAATCCCT TCAAAGTCGA TGTCTATGAC
TGGAAAGCAG AGGTGGTCTC AGAACAGGAT ATGCAAACAG GCAACCTCTC GGCCTCTGAT
AGCTCATTTG ACGAGCCTGT AAAAATAGTT GAAGTCAATT ATCAAATCGT GGTTCAGCCA
ATGAGATTTG ATGAATTAAT ACGTCACATC AAGCGCAACA ACAACGCTCT GTTTAAAGAC
GATGAGGGCC GACTCGATAT TGCAGGCAAA ATGACAAAAT TTAAGGATGC ATTAAAAATG
TATCAGGAGC AGTTTGTCAA AGATCACCTA CCGGCTAAAG CGAAAAAGAT TCAATTATCA
CTGACGGAGA TATCCAAGCT TGAAGATGCT CTAGGGGCTA AATCTGCCTT GGAAAAGTCT
GAATACCTGA TTAAAACGAT GGATTTCTAC AAAGCGGGCA GACACGTTGA ATTTACTGAT
GCGGATACCT CCGATATCCG TGTTGGCGTC ATTGCCGAAA TTGATTTCCC ACGGGAGCGC
AGCCAACTCT TCTTACTCTC CAAATACAGA ATGAAAATAG CCTTTGCGGG CGATGAAAAA
CTCACTGAAA TGTCACTGGC CTCATTGAGA GCAAGGAATA CCAGTCTGGA CAACTATGCT
AGAGCAGACA TTGATCCCGA TAAAACACTG GAGCAATATT ATTATCAGCA GCGTAAAGAA
ATTGAAGCCA CAGAGTTAGA GTTCAATAAT GCGCCTACTG GATTGTTAAC TAAGCAAAAG
TTTTTATTAG AAGGTAATAT TTACCGAGCT TGTGAAATTG CCGCCGAACA ACAAATGGGT
TATCCAGTTC TCTATACTGA TGTAGATGGG AACCGGAAAA GGGCCGTATT GATGAAAGAG
CATATCACGC CTGATCACCT TAATGCCTTG CCACTCAGTA TGAATGCCAA CGATACTTTT
AGCTATATTA ATGAGTTTAT CAAAGAGGAT CACCCTGACA GAAGCGAGCA CATAAAAAAT
AATGCATTAC AACTGTTTGA TTCACCTTCA AAATCCTTGG AGGATGGCAA AGGGGTTAAA
TTAATTTGGC GACCGAGCAG AAATTGTTTT GATTTAAGCA TCTGCGGGAT AAAATCACAA
AATAATAATC TAATTAGCAA TTCATTGATA TTTGATGTGG GTGAAAAAAC GCCGCACGAC
AGCCTTGCGA TTAAAATTAG CGGTAATCGA GTCTGCATGA AGGGCGTGGT GAAAGTGGAA
GATCTTGAAA AGTTATTAAC GCGACTTGAA AACGGTAAGC ATATCGGTAA GTTTTATATT
CCCAGCCCAA AGTTAGAGAT AATTAATGAA TTAAAACAGA AAAACAAAAA TATAATGGAA
AGTGTGCTTA AAAAAACTGA TCACTACGAC ATGGTAATGT AG
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| Protein sequence | MSLNKEQKTK AIGIITKSQS IMLSDKIQTD TQSDQNIYYS ARPIWFGLLD SLRKEGIVDN
DKNTTQVENI IVTNNAIPFE LIERNELSPV SSGSLISLAN EILENEANFL LYSPMSKAVT
VIWRPAKQYC LDKFICKDVG EAIQDENIVN VYLTDDEVAN RLLTSISWGY TKDLTRTKII
NRYITDDFDS CLHLAELSNI IEGIHPEFSK TGDVKQNIER FLQRQTDTDP RRAARSAKYW
VEKYTGSAPF TLSPNLAKQY GNELLTLVAQ YDQEKQAETT NTQNNPNKLK RSTKWVDLAT
HNLYLGEQHF SDNRDRLMLV DLDNFITKNK RLEELKNIGF IPLAGTPRFE GGIYYLTSED
QRLKPSSLAA ALGINRCPVI EMDIDDIPKM FKAKVFERFE INVNALSLSS ELLGTNSDGH
EVFNSPTGRF IRQSKFDVIL EGTDAADNVG HTSFLRARSN QDLRLCAELF VKDIFNGGRK
QWTDVTKFAQ VIFPDGHADD RQLHQLQEAI EAASYRTFAA RSVDVSDQDA FDLAKNVYYG
LPVARMRTGE SLSLQQYSTT LPLSVVAQRL VIGKDHTEGK SLIEPTAGNG GLLNRIGPNI
KKYLMELDPN RIDALKEAFP DAIIAQGDAT LIPFSQTFDL QKGVDYVITN PPFGRMDTPK
SFDVLPNVRR LDHYIALQAL KARKNNGRAV LILGADKNQS DGTLSGGSKN LMYYLNDFYQ
VEGAVELDGR LYARQGAAFN IRVVVVGQKR DQPIQAVIPE KLPVLTTYDE LWDWSEGLIT
RYEADHHIPT LQQNNEAEPE LPVPRLNVPQ PQGQPKASAE PKAKAPAKSR AKRVTAHSDS
ANSPDSDTPI TGEPAQISDS SLGHQVTTNE PPKTDSTDIQ KAKNPQKTVV RNINEFQAPY
QAASKLGTAT AMIPINMSAA TYSALNRLEM RYGSVDDYVS DKLKYRKEDL SSYFSPEQID
AIALGISAVE NNRGMINADQ TGIGKGRFVA AMLRYARLNN KLPIFLSVKP ELFTDIFRDI
SDINSMELFK KPFIFNNTVN VKVYGSESEE LFPATSKKEL NDALLKGEVE NTVDLVMSTY
SQFGRERSKN KKAGLLLSLA NKDAMIILDE SHIAAGSSNT ADIVSDAVLN SGSALYASST
PIKGCSNFSL YSKCFPSSVD ILNLSETLTL GGEGLQEAIS ANMAQDGSIS RREHDYSKLT
FETRYPSPEN EQRNRDLMDK VADILSEMAY LSGDVNSIVK SINTDAKHEW ESIPEALRSG
NRMGASSMNF SSRLYNISRQ FILGIKTEET ATAALEALAA GMKPVVAVEN TGESLLRQLI
ASKTGSDELS DELETLDEKG ALTPDEALRR QLLVDSMASA SKEILFEQSP QFRDLLEIVL
DRLAKITIRG RYGDVTTQNA AEDPEYFEKQ EDVREKIRNF PDLSLMPIDE FKHSLQSQGF
RVAEVSGRKV SLIPVVINNQ SMWRVSFHEK ADAVSNVAGF QNGKYDAIVI TRSGSTGISL
HSSNRFADSD IRQRYFIVQQ KAANISEFLQ WMGRVNRKDQ VIPPIIVNIE SGLPAEARQT
MMHNSKLRKL SANTTSNREN ENLEGDEDLL NSVGDKIALE YLTENPDIAD ALDIALPKAG
ESPSSSASEN PYINKLMGRL MMIPVNQQET VLKLLSERFI ERIEQLEQEG INPFKVDVYD
WKAEVVSEQD MQTGNLSASD SSFDEPVKIV EVNYQIVVQP MRFDELIRHI KRNNNALFKD
DEGRLDIAGK MTKFKDALKM YQEQFVKDHL PAKAKKIQLS LTEISKLEDA LGAKSALEKS
EYLIKTMDFY KAGRHVEFTD ADTSDIRVGV IAEIDFPRER SQLFLLSKYR MKIAFAGDEK
LTEMSLASLR ARNTSLDNYA RADIDPDKTL EQYYYQQRKE IEATELEFNN APTGLLTKQK
FLLEGNIYRA CEIAAEQQMG YPVLYTDVDG NRKRAVLMKE HITPDHLNAL PLSMNANDTF
SYINEFIKED HPDRSEHIKN NALQLFDSPS KSLEDGKGVK LIWRPSRNCF DLSICGIKSQ
NNNLISNSLI FDVGEKTPHD SLAIKISGNR VCMKGVVKVE DLEKLLTRLE NGKHIGKFYI
PSPKLEIINE LKQKNKNIME SVLKKTDHYD MVM
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