| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0066 |
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| Symbol | |
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| ID | 5384102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 25039 |
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| End bp | 25992 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640857072 |
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| Product | type IV secretion system protein |
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| Protein accession | YP_001393261 |
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| Protein GI | 153930595 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 81 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGAAT CCTTGCTCAA AGATTCTGGC TTTGTTGATT TATATCTTGG TGATGATTAT
ACCGATATAA AAGGCATGAT AGGGGCAAGC AATAGGCTTG CCCCTGCGCC AGAAATATTA
AAAAACGATA TCGAGAGTTT AAGACAACAA TGTTTGAATT TTTATCATGC AGAAAAAAGG
AATGAATTCT CTATTTTTTA TGGTGAACGG TTGTACAGGG TAACAACAAC TATTGATGTT
TATCAAAATA TTGGTTTTGT TATCAGACAA ACGCCGAATG AATTATTCAC TCTACAAAAA
GTAGGTCTAT CATCTGATCT TATAAAGCTC ATCAGCCAGA ATAATAATTC TGGTTTAGTT
TTAGTTTCAG GAAAAATGGG AGCAGGGAAG ACAACCACGG CAGCGGCTAT GATTTGCCAC
AGAATTAAGG AGAGCGGAAA CCTTGGTGTT TCAATAGAAG ATCCGATAGA AACATTACTC
GGTGGAAAAC ATGGTGATGG TCGCTGTATT CAACTGGAAG TCTCTGATAA TGAGGGATAC
CCGCTAGCGA TAAAGCGGGC CTTGAGAATG GGGGCCAATA ATATCCTCAT AGGGGAAATA
CGAGACGCGC AGACAGCCCA TGAAGTCATG AAAGCATCTC TGAATGGTGC ATTCATTGTT
GCTACGATTC ATGCGAATAA TTGTATTGAT GCAATTGAAC GATATTCTAT TTTCTGTAAT
GAAATAAACA GTAAAGCAAA CTCGATAATT GCAAAATCAC TTTTTATTGT CACTAATCAA
GTGTTAATGC CATCTATATA TGAAAGTAAT ATAAGAGGTT ATACATGTAC AGTGAATGGT
TACGATATTC GCGCGAGTAC AACTATTCAG GCAAAAATCA GAGACGGAAA TTTCCAAACC
TTAAAAGATG AATTTGACAG CATCAATCAA AAGCAAATGC GACATTCTCT ATAA
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| Protein sequence | MTESLLKDSG FVDLYLGDDY TDIKGMIGAS NRLAPAPEIL KNDIESLRQQ CLNFYHAEKR
NEFSIFYGER LYRVTTTIDV YQNIGFVIRQ TPNELFTLQK VGLSSDLIKL ISQNNNSGLV
LVSGKMGAGK TTTAAAMICH RIKESGNLGV SIEDPIETLL GGKHGDGRCI QLEVSDNEGY
PLAIKRALRM GANNILIGEI RDAQTAHEVM KASLNGAFIV ATIHANNCID AIERYSIFCN
EINSKANSII AKSLFIVTNQ VLMPSIYESN IRGYTCTVNG YDIRASTTIQ AKIRDGNFQT
LKDEFDSINQ KQMRHSL
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