| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0063 |
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| Symbol | |
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| ID | 5384107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 21911 |
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| End bp | 23443 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640857069 |
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| Product | putative type IV secretion system protein PilQ |
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| Protein accession | YP_001393258 |
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| Protein GI | 153930625 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 73 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTT TAAATTTATC CGGTATTGAT GGTGTTGCTG ATTATCATTT GCCAGCAAAA
TTAAAAGATG CAATGTGTCT GGTCAAAACA GATTTAGGCA ATATTGAATT AAGGGTGTCA
AGCCACTTAA TTAACTCTGC TGAAGTCATG GATTATGAGC GACAACTAAA AAAAACAAAC
ACGGAATTTA AATTAGTTCC ATCCAATATA GCTGAGATTG TAGAGCTTAA TCAGCAAAGT
GGGGTAACAA CTCAAGAGCA GTTGAATATT ATTCACGGTA AAATATTTGA AATTTTTTCG
GCGGCAACAG ACGCGAGATC GTCCGATATA CATTTTCGTT TACGCAGTAA GTTATGCAAT
GTCTTTTTTA GAGTTGATGG GAAGTTAAGG TTCTATAAAG AGTTAACGCC AGAAGATGGT
AAGTCATATA TTAACTCTCT CTTCAATACA CGGTGCGAAG ACCGGAGTCA TCAGTCAATT
TCCTACCAAG AACCTTGTGG GGCGAAAGTT AGCGAGGATT TTGTACAGCC ATTGGGGTTA
AGTGGAGGGC GCTTTGCCAG TCGGCCTGTT GCTGATGGGG GGATGGTTGC TGTTATTCGT
CTTATCTCTC GACGAAATGA AATTCTGTCA ATGGAACAGC TGGGTTTAAC TGACACTGAA
ATAGAAACGT TGGAGCGGGC TATAGCAAAG CCTACCGGAG TGATATTTCT AACCGGCCCT
ATGGGATCGG GGAAAAGTAC CCTGGCTCAG GTTGTTTGTG AACTGCTCAC CAGTCGAGAT
CCAGGGATAC ACCTGTTAAC GGTGGAGAAC CCTGTGGAAT CCCCTATTAA AGGTGCCGTT
CAAACGTCAC TTGGAACGGG AGAAGAGTGG TGGGAAGCAA TTAAAAGCAT GATGCGCCTG
GATTTGAACT GGATACTGAT TGGTGAAGTA CGAGATCCCC TTTCTGCTTC AGCAGCTATT
GAAGCGGCTC AAACCGGCCA CAATGTACTG ACAACAATCC ATACCACATT TCCTATTGAT
ACTATTTCTC GGTTAAAAAG TCTTAATGTA CAAAGTGATT TGATTACTGA TGCGTCATTG
ATTACCTGCC TGGTTGGTCA ACGACTGGCT CCAAAGCTGT GTCCCTCATG TAAACAAAAG
TACACCGATA GCAGCAAATC GGTTGCACCA GTAATTAAAA AGATTATTGA TAAACACTGT
GATATTGACA GTATTTATTT GAAAAACCCT CAAGGATGTA CTGAATGCTC AGGGGCTGGA
GTAAAAGGCC GAGTGGGTAT ATTTGAAGTC ATTGAAGTCG ATGCAAACTT TATGGATATT
TATCATAGCC AGGGGAAGAT AAAGGCTTAT GAACATTGGT ATATAAATGG TGGTGCCACA
TTATGTACTA ACACTCTTCG TTTAGTTAAT ACCGGCGAAA TCGACCCTGT TTTAAGTCAT
AAAGACGTTT GTAATTTGGA TCGCGATTAT CTCATCTTTA CTGATGAAGT GAGAGCCGCA
GCCAAAGTGA ATAGAGAGAA GATAAATGAA TAA
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| Protein sequence | MKVLNLSGID GVADYHLPAK LKDAMCLVKT DLGNIELRVS SHLINSAEVM DYERQLKKTN
TEFKLVPSNI AEIVELNQQS GVTTQEQLNI IHGKIFEIFS AATDARSSDI HFRLRSKLCN
VFFRVDGKLR FYKELTPEDG KSYINSLFNT RCEDRSHQSI SYQEPCGAKV SEDFVQPLGL
SGGRFASRPV ADGGMVAVIR LISRRNEILS MEQLGLTDTE IETLERAIAK PTGVIFLTGP
MGSGKSTLAQ VVCELLTSRD PGIHLLTVEN PVESPIKGAV QTSLGTGEEW WEAIKSMMRL
DLNWILIGEV RDPLSASAAI EAAQTGHNVL TTIHTTFPID TISRLKSLNV QSDLITDASL
ITCLVGQRLA PKLCPSCKQK YTDSSKSVAP VIKKIIDKHC DIDSIYLKNP QGCTECSGAG
VKGRVGIFEV IEVDANFMDI YHSQGKIKAY EHWYINGGAT LCTNTLRLVN TGEIDPVLSH
KDVCNLDRDY LIFTDEVRAA AKVNREKINE
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