| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0060 |
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| Symbol | |
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| ID | 5384115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 18434 |
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| End bp | 20140 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640857066 |
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| Product | PilN family type IV pilus biogenesis protein |
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| Protein accession | YP_001393255 |
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| Protein GI | 153930563 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA AATTAATAAC TGCTTGTGTC ATGGCGGCGC TGCTTTCTGG TTGCTCAATT
GGCCGTATTA ATAAAGTAAT AGACTCCGCG CAGTCAGATT CTGAAAAAGT CAGCAATATG
ATTGCAGAAA CGGCAACTGT TAGACCGCCA GTTAAAATCC ATGATGAGCA ATGGATTAAC
CCTATTCCGA TTAAGTCAGC AACAGCAGAT ATTCCGGCAG CAATGATTAA TTGCGTGATC
ACTTATAAAC CAGTACGGCC TCAAGATGTG TATCAGTTCG GCCAGGACGT TACGCAGCAG
TGCAATATTC CAGTTCGAAT TTCACCTGAT GCAGCCGCTA TGTTATCAGG CAATAACAGC
ACTGGAGGGG GGGGACGGCC AACCAATCAA ATGAGCAGCG TTCCAGCTCC GATTGTTCCC
CCTGAAGCTA ACGGCATGGT TCCACTACAG ACGTTGGGAA CCATGCAACC AGGTAACAAT
GGTAGCGTGG CTTATAGCGG CGGTGTAGCC CGTAAAATTA CAGATGTGGC ATTCTCTGGC
AACGTGGCAC GTCTACTCGA TATTGTCACC TCTCGCCTTG GCGTGTCGTG GCGATATGCA
AACGGTGAAA TCACTATTTT CTATCTCCAA ACTAAGCGAT TTGATATCGA TACGACTAAT
GCAAAATATA CATTAGAAAA TCAGCAAAAA AGTGGCTTAT CCACTCAAAG CGGAAGCAAT
GGCACTGGTG AAAAATCAAG TGGGATATCT GGTACTAGCG GCTCTAACAC ACTGCAAACA
ACTGAAATGT CGAATGATAT CTATGGAGAC ATTCAAAAAA CGGTTGAAAG TATGTTAACG
CCAGGAGTAG GGCGAGTAAG CATAAATCAA ACCTCTGGTG TCGTTGTTGT AACCGATGTT
CCCAACGTGG TGCGTAATAT TGGTGAGTAT CTGCAAGATG AGAACAGTAA ACTTTCCAAA
CAGGTTTTAT TTAAAGTTGT CATTTACACT ATTACATCTG AAGTTTCTGA TAATGTCGGA
ATTGATTGGG ATATTATCTT TAAATCCCTA TCAGGAAAAT ATGGTATAAA CCTTGCCAGC
TCATCAGGAT TAAGTACCGA TTTGGCAAAT GGGAGCTTTG AAATTTTAGA TACTGCTACA
GGTAAAGCAG CTCAATTTGC CGGTTCTCAG TTCATGCTTC AAGCATTGTC AAAACAAGCG
AATGTAACAG ATACAAAAAC ACTTAATTTG ATGACCACAA ACTTAGCTAC GGCTGGTTTA
TTAATCGGTA AACAAACGAC TTATTTACAG CGTTCATCTA TAACTTCAAT AGGTAGTGGT
AATTCTTCTG AACCGGTTCA GTCATTAGAA CCAGGACAAA TAACCACTGG TACTAATATT
GTTATATTAC CAAAAATATT AAATGATAAT GAAAAGATGA TGTTGACAAT GATGTTAGAT
ATAACGTCAT TAAATAAATT AAGGAAAATA GATACCGCAG ATAAAAAATT AAGTATTGAA
GGGCCGGATT CTGATTCCAG TTCTATTCCA CAACGGATTT GGTTGAAACC AGGTGAAACA
ATCCTAATGA GTGGCTTTGA ACAGATTGTG AAGGATGGCA GTAAGCAGGG CATGGGTGAT
CCTAATAATA TTATAATGGG CGGTAACATG TCGGGCAGTG ATAAGAAACA GTCCTTCGTC
ATTACTATTA CGCCTATTCT TCGCTAA
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| Protein sequence | MKIKLITACV MAALLSGCSI GRINKVIDSA QSDSEKVSNM IAETATVRPP VKIHDEQWIN
PIPIKSATAD IPAAMINCVI TYKPVRPQDV YQFGQDVTQQ CNIPVRISPD AAAMLSGNNS
TGGGGRPTNQ MSSVPAPIVP PEANGMVPLQ TLGTMQPGNN GSVAYSGGVA RKITDVAFSG
NVARLLDIVT SRLGVSWRYA NGEITIFYLQ TKRFDIDTTN AKYTLENQQK SGLSTQSGSN
GTGEKSSGIS GTSGSNTLQT TEMSNDIYGD IQKTVESMLT PGVGRVSINQ TSGVVVVTDV
PNVVRNIGEY LQDENSKLSK QVLFKVVIYT ITSEVSDNVG IDWDIIFKSL SGKYGINLAS
SSGLSTDLAN GSFEILDTAT GKAAQFAGSQ FMLQALSKQA NVTDTKTLNL MTTNLATAGL
LIGKQTTYLQ RSSITSIGSG NSSEPVQSLE PGQITTGTNI VILPKILNDN EKMMLTMMLD
ITSLNKLRKI DTADKKLSIE GPDSDSSSIP QRIWLKPGET ILMSGFEQIV KDGSKQGMGD
PNNIIMGGNM SGSDKKQSFV ITITPILR
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