| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0052 |
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| Symbol | |
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| ID | 5384083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 11094 |
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| End bp | 11981 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640857058 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_001393247 |
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| Protein GI | 153930568 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAATTATCTC TATATTAGCC CTTAGTGTTT TGGCTACACC CTCATATTCT
GTTCTTGCTG ATGATTTAGC CGACCAATAT TTTTCAAAAG AAACTCGGCA ATTAACACCT
CAAGAAAAAG CCGCGATTGC TATTGGTGAA AAATGGCAAA CAGGCAATGC TACCAGCAAA
CCTGTAGCGG CGACTGATGG ATCTATTCGG TTTATTTTTG GTTCCGGACA AATTCAGATT
TTATGCGCTG TTCTTCAAGT TTGTGATATT GCATTACAAC CAGGAGAGCA AGTCAACAGC
ATTAATGCTG GCGACCCACG CTTTATTGTT GAACCTGCTA TTACTGGATC TGGTGCTTCT
GAACAATTAC ATCTGATTGT GAAGCCATTA GATGTTGGCC TAGACACATC GCTTGTCGTC
GGAACAGATC GCAGAACATA TCATTTTCGT CTTCGTTCTT CCCGCAAAGA GTTTATGCCG
TTAGTTTCAT TCACCTACCC CGAAGATGCT CAAGCTAAAT GGGCAGCAAT TCAGGCGAGA
GAGAAGAAAG AGAAGACTGA TAATACCATT CCACAAACTG GTGAATATCT TGGGAACTTA
AACTTCAATT ACGATATTTC CGGATCAGCT CGTTGGAAGC CAACCCGAGT ATATAACGAT
GGTACAAAAA CCATTATTGA AATGTCGTCT GAAATGCGTC AGTCCGAAGC ACCAACTCTA
TTAGTTGTTA GAAAAAATGG AGGGGTGTTC AGTGACCCTG AAACGGTAAT GGTTAACTAT
CGAGTACAAG GAAATCGTTA CATAGTAGAC ACGATTTTTG ACAAGGCAAT GCTCGTTGTC
GGTGTCGGCT CAAGTCAAGA CCGCGTAACA ATTACCCGAG GGAAATAA
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| Protein sequence | MKKTIISILA LSVLATPSYS VLADDLADQY FSKETRQLTP QEKAAIAIGE KWQTGNATSK
PVAATDGSIR FIFGSGQIQI LCAVLQVCDI ALQPGEQVNS INAGDPRFIV EPAITGSGAS
EQLHLIVKPL DVGLDTSLVV GTDRRTYHFR LRSSRKEFMP LVSFTYPEDA QAKWAAIQAR
EKKEKTDNTI PQTGEYLGNL NFNYDISGSA RWKPTRVYND GTKTIIEMSS EMRQSEAPTL
LVVRKNGGVF SDPETVMVNY RVQGNRYIVD TIFDKAMLVV GVGSSQDRVT ITRGK
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