| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0051 |
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| Symbol | |
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| ID | 5384134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 10357 |
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| End bp | 11079 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640857057 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001393246 |
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| Protein GI | 153930573 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTCA ATCTGTTCAA AAAGAAAGAA AAAACTTTAG CGGCTAAAGT TTCTCAAACC
GATAACCCCT ATTTGAATGC ACGTCGTACG TGGAATGGTC ATGTTTCAGG GGTTATGTCA
GCTATTCAGA TCTGGCAGGT AGTTGGCATA CTGGCTCTCC TAATTGCTTT AACAGCCGTA
GGAGGAATAA TTAAGATTGG TAGCCAGTCA AAATTTGTTC CTCTTGTTTT TCAGCAAGAT
AGTACGGGAA ATACTCTTTC AGTAACTCGC GCTGACAAGA TACCTGATGC AAAAATTGAA
GACTATCGGA CTACAGCAGC TAAGTTTATT GAAAACATTC GGCTAGTTAC CGCTGATTCA
AGTTTACAAA GAAAGGCTGT TTTACAAACT TATTCTTATT TGTCCGCGAA AGATCCATCA
ACAATAAAAG CCAATGAATA CCTTAATAGC AGTAAAGAAG CCAATCCATT TAATCGGGCA
ACTAAAGAAT TAGTCAGTGT TGATGTTAAA TCAGTAATGA TTATTTCAGA TGAATCATGG
CAAGTAGATT GGGAGGAAAC ATTGAGGGGA AGAGATGGAA CTCTAAAAGG TAAACCATAC
ATGATGAGAG CCATTGTTAA TTTATATCAG AATCAACCAA CAGATGATAA TGCAGAAGTT
GAAGTGTTAC GTAATCCACA CTTTATCTTT GTTCGTGATT TTAATTGGTC AAAACCACTT
TAA
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| Protein sequence | MIFNLFKKKE KTLAAKVSQT DNPYLNARRT WNGHVSGVMS AIQIWQVVGI LALLIALTAV
GGIIKIGSQS KFVPLVFQQD STGNTLSVTR ADKIPDAKIE DYRTTAAKFI ENIRLVTADS
SLQRKAVLQT YSYLSAKDPS TIKANEYLNS SKEANPFNRA TKELVSVDVK SVMIISDESW
QVDWEETLRG RDGTLKGKPY MMRAIVNLYQ NQPTDDNAEV EVLRNPHFIF VRDFNWSKPL
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