| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0049 |
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| Symbol | |
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| ID | 5384103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 7516 |
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| End bp | 7830 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640857055 |
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| Product | conjugal transfer protein TrbD |
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| Protein accession | YP_001393244 |
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| Protein GI | 153930599 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 0.635043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTAC GCACGATCCC CATTCGTAAA TCCGGTAATC GACATAACCT CTTCATGGAT
GGGGATCGTG AAATGGTTAT GTTTTCTGGT TTGTTGGCCG CCATATTGAT ATTTGCTGCT
CAAGATTGGC GAGCTTTCTT TGCTGGTGTG GTTCTCTGGT TTAGTGCTCT TTGGCTATTA
AGACTAATGG CAAAATCAGA CCCCAAAATG CGACAAATTT ATATGCGCCA GCGCCTCTAT
AAAAAATATT ATCCTGCAAG ATCAACTCCG TTTCGAATCA ATACAGAAGC GCAAGGAAAG
CAATACAATG ATTGA
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| Protein sequence | MALRTIPIRK SGNRHNLFMD GDREMVMFSG LLAAILIFAA QDWRAFFAGV VLWFSALWLL
RLMAKSDPKM RQIYMRQRLY KKYYPARSTP FRINTEAQGK QYND
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