| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0048 |
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| Symbol | |
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| ID | 5384088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 7133 |
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| End bp | 7513 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640857054 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_001393243 |
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| Protein GI | 153930587 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 0.338701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATGA CCATGCCGAG TATCAACATT AGTAACAAAA CAATGCTTTT GTTAGGCATT
GCTTTGCTGC TGATGTTATC TACACATCCG GCATTAGCAT CGAATACGAG TGGAGGAGGG
CTACCATTTG ATGAATGGTT CACCAAAATT CGTCAGTCTG TAACCGGCCC GTTCGCATTT
ACAGCTGCAA TAGTTGGATT AGTAGCAACC GGTGCCACCC TCATTTTTGG AGGGGATATG
AATGGCTTTA TGAAAACTTT GATTTTTATT GTTCTTGTAA TGTCCTTCTT AGTAGCCGCT
CAAAATACAC TGGCGGCAAT CACAGGCCAA GGTGCCCAAA TCGCTATGAC ATTTAAATTC
ATGGAAGCGG GGTCTATATA A
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| Protein sequence | MQMTMPSINI SNKTMLLLGI ALLLMLSTHP ALASNTSGGG LPFDEWFTKI RQSVTGPFAF
TAAIVGLVAT GATLIFGGDM NGFMKTLIFI VLVMSFLVAA QNTLAAITGQ GAQIAMTFKF
MEAGSI
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