| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0023 |
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| Symbol | |
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| ID | 5384118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | - |
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| Start bp | 42867 |
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| End bp | 44906 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640857095 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001393284 |
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| Protein GI | 153930584 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA TAAAACGGTT ATTTATTGCT GAAAAACCAA ACGTAGCAAG AGCGATTGCC
GCTGAACTAG GAATTACAGG TAAAGGGAAT GGTTATATAA AATGTGGTTC GGATACCATA
ACATGGTGTT TTGGGCATAT GTTTGAACAA GCTGAACCTG ATGAATATAC ACCTGATGAT
GTACCAAGAA CCCCTAAAGG AAATAAAATT TGGCGAGAGA ATGAGTTACC AATAATTCCT
GAAGAATGGA TAATTAAACC AAGAGAAGAT GCCGAATCTC AATTGAAAGT GATTTCAGGT
TTCTTGAAAG AAGCCGACTT GATTGTTAAT GCAGGTGATC CTGATCGCGA AGGGCAGCTA
TTGGTTGATG AATTGTTAGA ATATTATAAT TGTAATCTAC CAGTTAAGCG TTATTGGGTT
TCATCTCAAG ACTCTGTTGC TGTTAAACGT GGTTTAGCCG ATCTGAAAGA TAATAAGCAA
TTTTATGGGT ATGGTGTAGC AGCCTTAGCT CGCGGACGGT GTGACTGGTT AATTGGTATG
AATTTGAGCC GAGCATATAC GTTACGGGCT AAGCGCGGTG GCTATGCTGT TTTACTGTCA
GTTGGACGAG TCCAAACTCC TGTTTTATCG CTAGTTGTAG GGAGGGATAG AGAAATAGAA
GCTTTTAAGC CTATTCCTTT TTATAAAATC AAAGCCGCTG TTAAATGCAA TGATAGCGCA
TTTGTAACTG ATTGGATCGC CAAGGAAGAC CAGGAGGGGT TAGACAGTGA AGGCCGTTTG
GTCGATAGAA ATATAGCTTC AAAATTGGCA GATAAGTTAA ATGAAAAAAC GGGAGAAATA
AAAGAATATA AGAAGACTCC ACAGAAAAAG CTCCACCCTT TTGGATTTTC TTTATCAAGT
CTTACTGTAG TTGCTTCAAA TAAATTTGGT TATAGCTCTG CTGATGTTTT GGAAATATGT
CAATCATTAT ATGAAACTCA TAAACTAACT AGCTATCCCC GTTCAGATTG TAAATTTTTG
CCTGAAACAC AATTTGCGGA TGCTCATGCT GTCCTATCTG CAATTAAGCA TGTTAATCCA
GATAAGGCTG ATTTAGTTGA TGCTGTTGAT ATTAAAATAA AATCAAGGAT ATGGAATGAT
AATGAAGTGA GTGCTCATCA TGCAATTATT CCAACTATGC ATATGGGTTC TGCGGATAGA
TTAAATGTAA AAGAGAAGAA CATATACGAT TTAATAGTCA GGTCGTATTT GGCTCAGTTT
TATCCTGTAC ATGAATTTCT TAAAACAACC GTGTCAATTG ATATTGATAC TGAAACTTTT
AAAGCTGAGG GTAATACAGT TACACACGCC GGATGGAAGA GTATTTATAC AGAAAGTGAA
GAGGACGATG AAAAAAATGC AGTGCAAACT TTTGTGGTAA TGAAAAAAGG AGATACTGTC
ACTTGCTTAA AATCTTCATT AGTAGATTCA AAAACTAAAG CACCACCTAG ATTTAATGAT
GGTTCTTTGA TTGCTGCAAT GGAAAATATT CATAAATATG TTCCTGATTC AGAATTAAAA
AAATTACTGA GAGATGGTGA TGGTATTGGT ACTGTTGCCA CAAGGCCATT TATTATTGAA
GAGTTGAAAA ATAAAGGTTA TTTGGAGTTA AAAGGTAAGC AATTAATTAG CACTACTTTA
GGCAGAAGTA TCATAGATAT TTATCCTGAA GTGATGAAAA GCGCAGTTTT AACAGCATTA
AATGAGCGTG TATTTATTGA TATACAAAAA GAACCATCGG GAATAGATGA TTTTCTAGAA
AAACAAATCA AGTTTATTAC TGACCAAGTA GAAAAAGCAG GTAATGGCGT AGCCAAAGTT
TCTGGCGCTA AACAGGTTGC CAAAATATCG ACCATTCATA AATGCAAATC TTGCGGAAAA
GGGCTTGTTC ACAGAACCGG AAAAAAAGGG TTGTGGTGGT CATGCAGTGG TTATCCCGAA
TGTAATCAGT CCTACCCTGA TGCAAAAGGA AAGCCTAACT ATACCAAAGG TAAGGAGTAA
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| Protein sequence | MSDIKRLFIA EKPNVARAIA AELGITGKGN GYIKCGSDTI TWCFGHMFEQ AEPDEYTPDD
VPRTPKGNKI WRENELPIIP EEWIIKPRED AESQLKVISG FLKEADLIVN AGDPDREGQL
LVDELLEYYN CNLPVKRYWV SSQDSVAVKR GLADLKDNKQ FYGYGVAALA RGRCDWLIGM
NLSRAYTLRA KRGGYAVLLS VGRVQTPVLS LVVGRDREIE AFKPIPFYKI KAAVKCNDSA
FVTDWIAKED QEGLDSEGRL VDRNIASKLA DKLNEKTGEI KEYKKTPQKK LHPFGFSLSS
LTVVASNKFG YSSADVLEIC QSLYETHKLT SYPRSDCKFL PETQFADAHA VLSAIKHVNP
DKADLVDAVD IKIKSRIWND NEVSAHHAII PTMHMGSADR LNVKEKNIYD LIVRSYLAQF
YPVHEFLKTT VSIDIDTETF KAEGNTVTHA GWKSIYTESE EDDEKNAVQT FVVMKKGDTV
TCLKSSLVDS KTKAPPRFND GSLIAAMENI HKYVPDSELK KLLRDGDGIG TVATRPFIIE
ELKNKGYLEL KGKQLISTTL GRSIIDIYPE VMKSAVLTAL NERVFIDIQK EPSGIDDFLE
KQIKFITDQV EKAGNGVAKV SGAKQVAKIS TIHKCKSCGK GLVHRTGKKG LWWSCSGYPE
CNQSYPDAKG KPNYTKGKE
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