Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_A0019 |
Symbol | |
ID | 5384105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009704 |
Strand | + |
Start bp | 38579 |
End bp | 39370 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640857091 |
Product | putative integrase/resolvase |
Protein accession | YP_001393280 |
Protein GI | 153930591 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAATTG CGGATAATGA AATGTCGAGC ATCATCCCTC ACGATTTGGG GCAGATTTCA CGTAGCGCGA TCCGCGCACC GGCCCCGCTG TTTAGTTACG GTCATGCCCT GGCACTGCGT GAAAAAGTGC TGGCCTCCGG TGATGCGGAA TTGCCGCTCT ATCTGCTGGC CCCCGAAGTC ACAGTGTTAC TTTCCTATCT GCCTGACTTG CGGCAACGGC TGCTGATCGA AACCTTGTGG AACACCGGCG CACGATTAAA TGAAGCGCTG GCCCTGACGC CAGCCTGTTT TCACATCGAG GGCGACTCGC CGTTTGTGGT ACTGAAGACA CTGAAGCAAC GGCAAAAAGG ACGGGGCCGC CCGAAAGAGG GCCAGACACT GAAACGCATC GTGCCGCTGC TCGATGAAAA CTATGTGCGC CTGGTACACG AATACCTGGC TACGTTTCGG CCCAAGAAAT ATGCACCGCT GTGGGTGAAC GAGCACGGCG ACACCATCAG TGATGAAACC CCGCGCACCT GGTTACGTGC TGCTGTGACA CGCGCAAACC GTGACAGTGT AACGTTTAGT CTGCCGGTGA TCACCCCGAA AACCTTTCGG CACTCGTTCG CCATGCATTT AGTGCAAAGC GGTGTGGCCT TTAAAGTGGT GCAAACCTTC ATGGGCCACA AGGACGCCGC CAGTACCGAA GTGTATACGC GAATATTTGC GCTGGATGTG GGGGCGCAGT ATGGGGTGAA GTTCAGTATG GCAGCGGCTG ATGCAATGGC ACTGGTGCGC CGTAGGTCTT GA
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Protein sequence | MQIADNEMSS IIPHDLGQIS RSAIRAPAPL FSYGHALALR EKVLASGDAE LPLYLLAPEV TVLLSYLPDL RQRLLIETLW NTGARLNEAL ALTPACFHIE GDSPFVVLKT LKQRQKGRGR PKEGQTLKRI VPLLDENYVR LVHEYLATFR PKKYAPLWVN EHGDTISDET PRTWLRAAVT RANRDSVTFS LPVITPKTFR HSFAMHLVQS GVAFKVVQTF MGHKDAASTE VYTRIFALDV GAQYGVKFSM AAADAMALVR RRS
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