| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4478 |
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| Symbol | |
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| ID | 5375693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | + |
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| Start bp | 5245732 |
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| End bp | 5249421 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640846006 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001381640 |
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| Protein GI | 153007315 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.419935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCC CCCGACCTGC CGCAGAGGAA GCCGCCCCGA CCGCCCCGCG CGCCCGAGTG
AGCCGCGCGC TCGAGACCGA CCGCCGCGCC GACGTGGTCG GCCTCCTCGG CGCCGCGCGC
GGCCTCCTCG CGCGGGACCT GCTCGCCCCG GGCCCGGCGC GGGCCCGCTC CCTGCTCGCC
GTGGCCCCCG ACGAGGACGA CGCCGAGGCG CTCGCCCGGG ATCTCGCCTT CTTCCTCGGC
CCGGACGCGG TGCTGCGCCT CCCCGCCGAC GCCGTGCTCC CCTACGACGA TCTCTCGCCC
GACCGCGGGG TCGAGATGGA GCGGCTCTCC GCGCTCGCGC GGCTCCATTT GGCCCCCGAC
GGCGCCAAGG CGATCGTGGT CTCCGCCCGG GCGCTCGCGA GGCGGATGGT GCCGCGGCGG
GTGTTCGAGG CGGGCGCGGA CCTGCTCGGC AAGGGGGTGA GCGTCGAGCG CGAGGCGCTC
GCGGCGAAGC TCGTGCTGCT CGGCTTCACC CGCACCCCGC TCGTCGAGGA CCCGGGCACC
TTCGCGGTGC GCGGCGGGAT CGTGGATCTG TGGAGCCCCG CCGATCCCGC GCCGGTGCGG
CTCGAGTTCT TCGGCGACGA GATCGAGAGC TGCCGCGCCT TCGACCCGCA GTCGCAGCGG
AGCGAGGGCG AGGTGGCGGA GGTGCTGCTC TGCCCGGCGC GCGAGGCGCT CTTCTCGGAG
GAGGGGAAGG AGGCGGCGAA GGCGGCGGTG CGCGACGCGG CCGAGCGGGT GAACCGCCCG
ACCTCGCGGG TGCGCGAGGT GCTCGACGCC ATCGACGCGG GCACCCCCTT CTTCGGCCTG
GAGGCGCTCC TCCCCGGCTT CCATCCGGGC GGGCTCGGGA CCCTGTTCGA CTACCTGCCG
CCCGGCACCG CGGCGTACGT GGACGACGCC TCCGGCGTGG AGGAGGCGCT CTTGGAGCTC
GACGCGGAGC TCGCCCGCGA GCACGAGGCG GCGGTGCGGC GCGAGGAGCT CGCGCTGCCC
CCGGCGGCCC ACTTCCTCCC CGCCGCCGAG GCGCTCGCGC GCCTCGCGGA GCGCCCCGTC
GTCCGGCGCC ACGGCGTGTG GCTCGGCACC GCCGAGCCCA TCCGCTTCTC GCTCGGCGAC
ACCCACGCCC TGCGGGGCGA GATCGAGGCG GCCCACGGCG ACGAGGGCGC GCTCGCGCCG
CTCACCCGGC GGCTCGACGA CTGGCGTCGC CGCGGGGTCG CGGCGGTGGT GGCCTGCGGG
TCGGCCTCGA CCGTGGACCG GCTCCGCCGC CTGCTCGAGG ACCGGCGCCA GGCGGTGCGC
GTGCACCCGG GCCAGCCCGG CGACGCGCGG GCCATCTACG ATCCCGCCAT CCACGCCCAC
GTCTTCACCG GCGAGATCTC GGCGGGGTTC GTGGACGGCG AGGGCGGGCT CGCGGTCGTC
GCCGACGAGG AGATCTTCGG CCGGCGCGTC CGCAAGAAGG CGCGCCGCAC CAAGGAGGAG
AACGCGTTCG CGGCGGCGTT CCGCGACCTG AACGAGGGCG ATCTCGTCGT GCACGTCGAG
CACGGCATCG CGCGCTACCT CGGCCTCACC AAGATGCAGA TCCGGGGCGT GGAGGGCGAC
TTCCTCGTCC TCGCGTACGA CGGCGCGGAC CGGCTGTACC TGCCGGTCGC GAAGCTGCGC
CAGGTCCAGA AGTTCACCGG CGCCGCGCCG GAGTCGGTGC GGCTCGATCG GCTCGGCGGC
CAGTCCTTCG CGCTGCGCAA GGCGCGGGTG AAGGAGCAGC TCCTCAAGAT GGCCGCGGAG
CTGCTCGACA TCTACGCCGC GCGCGCCGCC CACCCCGGCC ACGCGTTCGG GGAGCCGGAC
GAGATCTTCC GCGAGTTCGA GGCGGAGTTC CCCTGGGAGG AGACGCCCGA CCAGGCCAAG
GCCATCGCCG ACGTGCTCCG GGACATGCGC AAGCAGCGCG GCGGGCCCGC CGCGGCGGCG
CCGATGGATC GATTGGTCTG CGGCGACGTC GGCTACGGCA AGACCGAGGT GGCCATGCGC
GCCGCGATGC TGGCGGTGCT CTCCAGGAAG CAGGTGGCGG TGCTCGTGCC CACCACCGTG
CTCGCCTCCC AGCACGAGCG CACCTTCCGC GAGCGCTTCA AGGGCTACCC CGTCCGCATC
GAGGCGATCT CGCGGATGAA GAGCGCCGAG GAGGTGAAGC AGGTCCTGAA GGACGTCGCC
GCCGGGAAGG TGGACGTCGT CGTCGGCACC CACCGGCTCC TCGCCGCGGA CGTGTCCTTC
AAGGAGCTCG GGCTCGTGGT GGTGGACGAG GAGCAGCGCT TCGGCGTCGC CCACAAGGAG
CGCCTGAAGA AGCTGCGCAG GCTCGTGGAC GTGCTCACCC TCACCGCCAC GCCCATCCCG
CGCACCCTGC ACATGAGCCT CGCCGGCGTG CGCGACCTCT CCATCATCGC CACGCCCCCC
GAGGACCGGC GCGCCATCCG CACCTTCGTC ATGAAGTTCG ACCCGCAGGT GGTCCGCGAG
TCGATCGAGA CGGAGCTGAA GCGCGGCGGG CAGGTCTACT TCGTCCACAA CCGCGTCCGC
TCCATCGCGG CCATGCAGAA GTTCCTCGCC GACATCGTGC CGTCGGCGCG GGTGGGCGTC
GCGCACGGGC AGATGGCCGA GGGGAAGCTC GAGGAGGTGA TGAGCCGCTT CGTCCGCAAG
GAGCTCGACG TGCTGCTCGC CACGAGCATC ATCGAGAGCG GCCTCGACAT CCCGAGCGCG
AACACCATCA TCGTGAACCG CGCCGACCAC TTCGGGCTCG CGCAGCTCTA CCAGATCCGG
GGCCGGGTGG GCCGCAGCCG CGAGCGCGCC TACGCGTACC TGCTCGTCCC CGCCCGCAGG
CCCGTGACGA AGGACGCGCA GAAGCGGCTG GAGGTGCTGC AGCGCTTCAG CGAGCTCGGG
GCGGGCTTCA AGATCGCGAG CCACGACCTG GAGATCCGCG GCGCGGGCAA CCTGCTCGGC
AAGGACCAGT CCGGCCAGAT CGAGGCGGTG GGGTTCGAGC TGTACTCCGA GCTCCTCGAC
GAGGCGGTGC GCGAGCTCAA GGGCGAGCCG CCGCGGGAGG ACATCGACCC CGACGTGCAG
CTCCCCGTCC CGGCGTTCAT CCCCGACCCC TACATGCCGG ACGTCCACCA GCGCCTCTAC
TTCTACAAGC GGCTGGCGCA GGCCACGACC GACGAGGAGC TCGACGAGGT CCGGGCCGAG
ATCGTGGACC GCTGCGGCGA TCCGCCCGAG GAGCTCGACG CGCTCTGCGA CGTGATGGCC
GTGAAGGTGC GGCTGCGCGC CCTGCGCATC CGCGCGCTGG AGGCCGGCCC CGGCCGGCTC
GTGCTCACCC TCGGCGAGGG CGCCGCCCTC GACCCCTTCC TCCTCGCGAA GCACGTCACC
GCCTCGAGCG GCGCGCTGCG GCTCACCCCC GACATGAAGC TCGTCGCGGC GCTCGGCGGC
GCCCGGCCCG CGGCCCCCAA GGCCGCGCCG CCGAAGGGCG CGAAGGGGCC GAAGGGGAAG
GCCGCGGGCC GGCCCGCGCT GCCGCCCGTG CGCGCCGCCG CCGTCGGCCT GGTGCCCTCG
CCGGCGATGG AGCTGAGCAC CGGCCGCGAG CTGCTCGGGG CCGCCCGGGA GCTCCTCGCC
GGCCTCGCGC GCTGCGCCCG CCCCGAGTAG
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| Protein sequence | MSTPRPAAEE AAPTAPRARV SRALETDRRA DVVGLLGAAR GLLARDLLAP GPARARSLLA
VAPDEDDAEA LARDLAFFLG PDAVLRLPAD AVLPYDDLSP DRGVEMERLS ALARLHLAPD
GAKAIVVSAR ALARRMVPRR VFEAGADLLG KGVSVEREAL AAKLVLLGFT RTPLVEDPGT
FAVRGGIVDL WSPADPAPVR LEFFGDEIES CRAFDPQSQR SEGEVAEVLL CPAREALFSE
EGKEAAKAAV RDAAERVNRP TSRVREVLDA IDAGTPFFGL EALLPGFHPG GLGTLFDYLP
PGTAAYVDDA SGVEEALLEL DAELAREHEA AVRREELALP PAAHFLPAAE ALARLAERPV
VRRHGVWLGT AEPIRFSLGD THALRGEIEA AHGDEGALAP LTRRLDDWRR RGVAAVVACG
SASTVDRLRR LLEDRRQAVR VHPGQPGDAR AIYDPAIHAH VFTGEISAGF VDGEGGLAVV
ADEEIFGRRV RKKARRTKEE NAFAAAFRDL NEGDLVVHVE HGIARYLGLT KMQIRGVEGD
FLVLAYDGAD RLYLPVAKLR QVQKFTGAAP ESVRLDRLGG QSFALRKARV KEQLLKMAAE
LLDIYAARAA HPGHAFGEPD EIFREFEAEF PWEETPDQAK AIADVLRDMR KQRGGPAAAA
PMDRLVCGDV GYGKTEVAMR AAMLAVLSRK QVAVLVPTTV LASQHERTFR ERFKGYPVRI
EAISRMKSAE EVKQVLKDVA AGKVDVVVGT HRLLAADVSF KELGLVVVDE EQRFGVAHKE
RLKKLRRLVD VLTLTATPIP RTLHMSLAGV RDLSIIATPP EDRRAIRTFV MKFDPQVVRE
SIETELKRGG QVYFVHNRVR SIAAMQKFLA DIVPSARVGV AHGQMAEGKL EEVMSRFVRK
ELDVLLATSI IESGLDIPSA NTIIVNRADH FGLAQLYQIR GRVGRSRERA YAYLLVPARR
PVTKDAQKRL EVLQRFSELG AGFKIASHDL EIRGAGNLLG KDQSGQIEAV GFELYSELLD
EAVRELKGEP PREDIDPDVQ LPVPAFIPDP YMPDVHQRLY FYKRLAQATT DEELDEVRAE
IVDRCGDPPE ELDALCDVMA VKVRLRALRI RALEAGPGRL VLTLGEGAAL DPFLLAKHVT
ASSGALRLTP DMKLVAALGG ARPAAPKAAP PKGAKGPKGK AAGRPALPPV RAAAVGLVPS
PAMELSTGRE LLGAARELLA GLARCARPE
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