Gene Anae109_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4398 
Symbol 
ID5378337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp5144636 
End bp5145691 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content76% 
IMG OID640845926 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001381560 
Protein GI153007235 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.269001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGGA ACGGCAAGCC TCCTCCGCTC CCGGCGGCGC TGGCCCGGGC GGCCGTCGAC 
TCCATCGCCG ACGCGGTCCT GATCGTCGGC GCCGACGGCG GGGTCGTCCA CCTGAACCCC
GCCGCCGAGG AGCTCTTCGG CCGCAGCCGG GAGCGCGCGG TGGAGCTGCC GGTGCGCGCG
CTGCCGGGCG GCGCGCAGCT CGCGGTCCTC TGCGAGCGCG TGCGCAGCTC GCAGGAGAGC
CAGTCGATCC ACTACCCGAG CCCGCAGGAT CCCGGCATCC CGATCGCGGT GGAGGCGGGG
CCGCTCCTCG ACGGCTCCGC CTGCGTGGGC ACCGTCGTCG TGCTGCGCAT CCCGCGCGCG
TCGGAGCGCG CGCTGGACTT CGAGGCGCTG GCCGCGGGCC TCGCGCACGA GATCCGCAAC
CCGCTCGCCG GCCTGCAGGG CTCGGCGGAG CTCCTCGCCC GCGAGGCCGA AGGGCCGGCG
CGCGAGTACG CGGCGGTGAT CGCGCGCGAG GCGAAGCGCG TGGACGGGCT CGTGCGCGAG
CTCCTCGACC TCGCCCGCCC GGCGGCGCTC CAGACCGCGG CCATCGACCT GCACGAGATC
GTGGGCGACG TGCTCGTCCT CGTGCGCGGC ATCCCCGGCG CGGAGCGGGT CACGTTCGTG
GAGCGCTACG ATCCGTCGCT CCCCAAGCTG CACCTCGACG CCGAGAAGCT CACCCAGGTG
CTCCTGAACC TCGTGCGGAA CGCCCTCGAC GCGGTGGCCG GGCGGCAGGG GGCGCAGATC
GCGCTCGAGA CCGGCGTCTC GTCGCTCCGG CTCCGCTCCG CGAGCGGCCG CACCCGGCCC
CTCGTGCGGC TCTCGGTGCA GGACAACGGC TCGGGGATCG CGGAGCCCAT GCTGCATCGG
CTGTTCACCC CCTTCGCGAC CTCCAAGGCT CACGGCACCG GCCTCGGCCT GGCGGTGTCC
CGCCGCATCG TGGAGGCGCA CGGCGGGCGC ATCGAGGTGA AGAACCGCGC CGGCGGCGGG
GCGGAGGCGA ACGTCTACCT TCCGCTCGAC GCCTGA
 
Protein sequence
MSRNGKPPPL PAALARAAVD SIADAVLIVG ADGGVVHLNP AAEELFGRSR ERAVELPVRA 
LPGGAQLAVL CERVRSSQES QSIHYPSPQD PGIPIAVEAG PLLDGSACVG TVVVLRIPRA
SERALDFEAL AAGLAHEIRN PLAGLQGSAE LLAREAEGPA REYAAVIARE AKRVDGLVRE
LLDLARPAAL QTAAIDLHEI VGDVLVLVRG IPGAERVTFV ERYDPSLPKL HLDAEKLTQV
LLNLVRNALD AVAGRQGAQI ALETGVSSLR LRSASGRTRP LVRLSVQDNG SGIAEPMLHR
LFTPFATSKA HGTGLGLAVS RRIVEAHGGR IEVKNRAGGG AEANVYLPLD A