| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4372 |
|---|
| Symbol | |
|---|
| ID | 5375240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 5114304 |
|---|
| End bp | 5116229 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640845900 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_001381534 |
|---|
| Protein GI | 153007209 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.755089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0153537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA TCCTCATCGT CGATGACGAG CCCGTCATCC TCGACGTCTT CCGCCGCTTC
CTCGAAGGCG ACGGGCGCAG GCTCCTGCTC GCCGGCTCCG TCCGCGAGGC GCTCGCCATC
GCCGCCGAGG CCCGCGAGAT CGACGTCGCC ATCATCGACA AGAACCTGGG CGACGGCTCG
GGCCTGGACG TCGCGCGCGG GCTCAAGGCC GTGAAGCCAG ACGCGGAGGT GATCCTCGTC
ACCGGCTACG CCTCGATCGA CTCCGCCATC GCCGCGGTCC AGATCGGCGC CTACGACTAC
GTGACGAAGC CGGTCTCGGA CTACGACGCG CTGAACCTCA AGGTGCAGAA CGCGATCGAC
AAGGGCCGCA TGCGGCGCGA GCAGCGCGAT CTCGTCGCGC GCCTCATGGA GAGCGAGTCC
CTGCACCGCG GCGTCTTCGA GACCTCGTCC GACCCGATCC TGCTGGTGGA CGTGGACTCC
GGCCGCATCG GCGACGCGAA CCCCGCCGCG GAGCGGCTCT ACGGCGAGCC GCGCGAGCGG
CTGCGGGAGC GGTGCTACGG CGAGCTGCAG CCGCCCGGGA AGGACGGCGA GGTGGCCACC
CTCCCCGCGC CCGGCGCCCG CTCGCTCCCG GCGCGCCATC GCCGGCCGGA CGGCTCGGAG
CTGCCGGTGG AGCTCACCGC CGGCGAGCTG CGGCTCCAGG ATCGCTCGCT GCGCGTGCTC
TCCATCCGCG ACGTCTCCGA GCGCGAGCGC GCCGAGGAGG CGCGGCGCGC GCTCGAGCAG
AACCTCCGCC AGGCGCAGAA GATGGAGGCG GTCGGGCGGC TCGCGGGCGG CGTCGCGCAC
GACTTCTCCA ACGTCCTCGC GGTGATCCTG GGCTACTCCG AGCTGCTCAT GCGCGATCTG
CCGGCGGGCG ACGCGCGGTC GCGCGAGAGC GCGGAGGGCA TCGTCGAGGC GGCGCACCGG
GCGGCGGGGG TGACGCGCCA GCTCCTCACC CTCTCGCGCA AGAAGCTGCT GCGCCCGGAG
GTCCTCTCGC TCAACAAGGT GGTGCAGGAC CTCGGCAAGC TCCTCGCCCG CGCCATCGGC
GAGCGCATCG AGCTCACGAC GCGGCTGCAG GACGGCCTCT GGCCGGTGCT CGCCGACGCG
GACCAGCTCG CGCAGGTGCT GCTCAACCTG GCGGTGAACG CGCGCGACGC CATGCCCGAC
GGAGGCCCGC TCGCGATCGA GACCGCCAAC GTCGAGCTCT CGGAGCCGCC GCGCGACCTC
CCCATCCCCG CGGGCCGCTA CGTGTCGCTG GCCGTGAGGG ACGGCGGCTG CGGCATGACG
GAGGAGGTCC GCTCCCGCAT CTTCGACCCC TTCTTCACCA CCAAGGAGAC CGGCACCGGC
CTCGGGCTGG CCACCGTCTA CGGCATCGTG CGCCAGGCGG GCGGGGCCAT CCGGGTCGAC
TCGGAGCCGG GCCAGGGCGC CACGTTCACG GCGTTCCTCC CGGTGGGCGC CGAGCAGGGC
GGCCGGGCGC ACGTCCCCGT CGCGGCGGCC GCGCCGCGCG GCCTCGGCGA GGTGGTCGTG
CTCGCGGAGG ACGAGGACGC GCTGCGGGTC CTGCTCGGCC GCGTGCTGGC CGGGAGCGGC
TACGAGGTCG TCGCCGGGCG CAACGGGGCG GAGGCCCTGC AGGCGGCGCG CGAGCGGGGA
GGCCGGGTGG ATCTCCTCCT CGCCGACCTC GTCATGCCGC GCATGACCGG CGCGGAGCTG
GCGCACGCGC TCCAGGGGGA GCAGCCGGCC ATGAAGGTGC TCTTCATGAC CGGCCACACC
GAGGACGCCC TCGTCGAGGA CCGGCTGCGC GACGGCGACG TCGAGCTCAT CCAGAAGCCG
TTCACGAGCG AGATCCTGCT CGGCCACGTC CGGCGGCTGC TCGGGCCGGC GAAGGCGAGC
GCGTGA
|
|---|
| Protein sequence | MATILIVDDE PVILDVFRRF LEGDGRRLLL AGSVREALAI AAEAREIDVA IIDKNLGDGS
GLDVARGLKA VKPDAEVILV TGYASIDSAI AAVQIGAYDY VTKPVSDYDA LNLKVQNAID
KGRMRREQRD LVARLMESES LHRGVFETSS DPILLVDVDS GRIGDANPAA ERLYGEPRER
LRERCYGELQ PPGKDGEVAT LPAPGARSLP ARHRRPDGSE LPVELTAGEL RLQDRSLRVL
SIRDVSERER AEEARRALEQ NLRQAQKMEA VGRLAGGVAH DFSNVLAVIL GYSELLMRDL
PAGDARSRES AEGIVEAAHR AAGVTRQLLT LSRKKLLRPE VLSLNKVVQD LGKLLARAIG
ERIELTTRLQ DGLWPVLADA DQLAQVLLNL AVNARDAMPD GGPLAIETAN VELSEPPRDL
PIPAGRYVSL AVRDGGCGMT EEVRSRIFDP FFTTKETGTG LGLATVYGIV RQAGGAIRVD
SEPGQGATFT AFLPVGAEQG GRAHVPVAAA APRGLGEVVV LAEDEDALRV LLGRVLAGSG
YEVVAGRNGA EALQAARERG GRVDLLLADL VMPRMTGAEL AHALQGEQPA MKVLFMTGHT
EDALVEDRLR DGDVELIQKP FTSEILLGHV RRLLGPAKAS A
|
|---|
| |