| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4301 |
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| Symbol | ligB |
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| ID | 5375153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 5041919 |
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| End bp | 5043478 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 640845829 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001381463 |
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| Protein GI | 153007138 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.659287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCTCG CCGAGCTCGT CCAGACCTCC GACGTCGTCG CGCGCACCGC CGGGCGGCTG
GAGAAGATCG CGCGGCTCGC CGACGCCTTG CGGGGGCTCG CGCCCGAGGA GCGGCTCGCC
GGGGCGAGCT GGCTCGCCGG CGAGCTGCGC CAGGGCAGGA TCGGCCTCGG GCCCGCCGCG
GTGCGGGCGG CGCTGGAGGC GACCGCCCCG GCGGACGCGC CCGCGCTCGC GGTGCGCGAG
GTGGACGCCT CGCTCGACCG CCTCGCCGCG GCGCGTGGCG CGGGCTCCGG ACGCGAGCGG
GCGGCGCTGC TCGCGGCGCT GCTCGCCCGC GCCTCGGCGG ACGAGCGCGA CTTCCTCGCG
CGGCTCGTGC TCGGGGAGCT CCGCCAGGGC GCCCTCGAGG GCGTGCTCGT CGAGGCGGTG
GCGCGCGCGG CGGCCGTCCC GGCGGGGGAG GTTCGCCGCG CCGTGATGAT GGCCGGCGCG
CTCCCCCCGG TGGCGGAGGC GGCGCTCGCC GAGGGCGCGG CGGGCCTCTC CCGCTTCCGG
CTGCGGCTGC TGGAGCCGGT GCAGCCGATG CTCGCGCAGC CGGCGGCCGG CGTGGACGAG
GCGCTCGCCG CGCTCGGCGA GGCCGCGCTG GAGTGGAAGC TCGACGGCGC CCGCGTTCAG
GTCCACAAGG ACGGCGGCGA GGTGCGGGTG TTCTCGCGCG CGCTCCGGGA CGTGACGCCG
GCCGTCCCGG AGGTGGTCGA GGCCGTCCGG CGCCTGCCCG CGTCCTCGCT GGTGCTGGAC
GGAGAGGCCA TCGCGCTGCG CGGGGACGGC GCTCCCGAGC CGTTCCAGGT GACGATGCGC
CGCTTCGGCC GCAAGCTCGA CGTGGCGGGC CTGCGCGAGG GGGTGCCGCT CTCGGTGCTG
TTCTTCGACG CGCTCCACAC GGCCGGGGAG GATCTCATCG CGCGGCCCGC CTCCGAGCGC
CACCTCGCGC TCGCCGCCGC GGTCCCCGAC GCGCTCCGCG TGCCCCGGCT CGTCACCTCC
GACGGCGCCG CCGCGGCGGC CTTCCTCGAG GGCGCGCTCG CGCGCGGCCA CGAGGGGCTC
CTCGCGAAGT CGCTCACGGC GCCCTACGAG GCGGGCCGGC GCGGGGCGAG CTGGCTCAAG
GTGAAGCGCG CGCACACCCT GGACCTCGTG GTGCTCGCCG CGGAGTGGGG GAGCGGCCGC
CGCGAGGGGT TCCTGTCGAA CCTGCACCTC GGCGCCCGCG ATCCGGAGGG GGGCGGGTTC
GTCATGCTCG GCAAGACGTT CAAGGGCATG ACCGACGCGA TGCTCGCCTG GCAGACCGAG
CGCTTCCGCG CGCTCGCGCT CGGCTCGACC GACGGCTACG TCGTGCACCT CCGGCCGGAG
CTCGTGGTGG AGGTCGCCTT CGACGGCCTC CAGGAGAGCT CGCGCTATCC AGGCGGCCTC
GCGCTGCGGT TCGCGCGGGT GAAGCGTTAC CGCGAGGACA AGCGGCCGGA GGAGGCGGAC
ACCATCGCGA CGGTGCGGGC GCTGCACGCT CGTCAGGTGG CGGCGGAGCG CGGGACGTGA
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| Protein sequence | MQLAELVQTS DVVARTAGRL EKIARLADAL RGLAPEERLA GASWLAGELR QGRIGLGPAA
VRAALEATAP ADAPALAVRE VDASLDRLAA ARGAGSGRER AALLAALLAR ASADERDFLA
RLVLGELRQG ALEGVLVEAV ARAAAVPAGE VRRAVMMAGA LPPVAEAALA EGAAGLSRFR
LRLLEPVQPM LAQPAAGVDE ALAALGEAAL EWKLDGARVQ VHKDGGEVRV FSRALRDVTP
AVPEVVEAVR RLPASSLVLD GEAIALRGDG APEPFQVTMR RFGRKLDVAG LREGVPLSVL
FFDALHTAGE DLIARPASER HLALAAAVPD ALRVPRLVTS DGAAAAAFLE GALARGHEGL
LAKSLTAPYE AGRRGASWLK VKRAHTLDLV VLAAEWGSGR REGFLSNLHL GARDPEGGGF
VMLGKTFKGM TDAMLAWQTE RFRALALGST DGYVVHLRPE LVVEVAFDGL QESSRYPGGL
ALRFARVKRY REDKRPEEAD TIATVRALHA RQVAAERGT
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