Gene Anae109_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4298 
Symbol 
ID5378247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp5039023 
End bp5040252 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID640845826 
Producthypothetical protein 
Protein accessionYP_001381460 
Protein GI153007135 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0935094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.789322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TCCTCGACAC CATCGCGATG GCCCTGGGGA CGCTCCGCTC GAACGTCCTG 
CGCTCCGTCC TCACCCTGCT CGGCATCGTC ATCGGCGCGT CCACGGTGGT CGCCATGATG
TCGCTCACCG AGGGCTTCCG GCTGAAGCTG ACGAGCGACT TCGCCGCGCT CGGCGCGGGC
GCGTTCCAGG TGCAGAAGTG GCCGGCCCTG CAGTTCGGTC ACAACGACCG CCGCAAGTAC
GAGCGCCGCC CCGATCTCAC CCGCGAGCAG GGCGAGGCGC TGCGCGACCT CCCGCACGTG
GCCTACGTCT CCATCGAGGA GTGGGCGCGG CGGCCGGAGA CGCTCTCCAC CCGCGAGAAG
GCGACGAAGA ACAACATCAG CGTCTGCGGC GGGCTGCCGG ACTACGAGCT CGCGAACGGC
GTGGAGATCG CCCGGGGCCG GTTCATCAGC CACACCGACG TCCAGCTCGG CCGCCGCGTC
ATCGTGGTCG GCGCCGACGT GCAGGACATC CTCTTCCCCG GCCAGGATCC GCTCGGCCAG
GAGGTCCGGG TCCGCGGCGT CCCCTTCGAG GTGATCGGGG TGGCCGAGCG CGAGGGCTCG
ATCCTCGGAC AGTCGAAGGA CGGCTGGGCG GTCGTCCCGT GGACCGCCTA CGAGCGCGCG
CTCGGGAAGG TGCGGAACAA CAACATCGCC GTCATGGCGA CCACCCCCGA CGACTCGGCG
AAGGCGCTCG AGGAGGTGGT GGCGCGGCTC CGCCGCGTCC GCGGGCTCGC GCCGCACGAG
GAGAACGACT TCGAGATCTT CTCGAACGAC ACCTCCGCCC AGCTCTTCGA CAACCTCGCC
CAGATGGTCG GCGCGGCGAC GTTCGGGGTG TGCGCGCTGG CCCTCCTCGT CGGCGGCATC
GGGGTCATGA ACATCATGCT CGTCTCGGTG ACCGAGCGGA CCCGCGAGAT CGGCATCCGC
ATGGCGCTCG GGGCGCGCCG CCGGCGCATC CTCTCCCAGT TCCTGGTCGA GTCCGTCACC
CTCTCCGCCC TGGGCGGGCT CGTGGGCGTG CTCCTCGGCG GCGGCCTGGC GGTGGCGGCG
CGGGAGATCT GGCAAGTTCC CGCGAGCATC CCGGCCTGGG CGGTGGTAGT CTCCCTCGCC
TCCGCGGGCG GGGCGGGCCT CCTGTTCGGC ATCTACCCCG CCGCGCGGGC GTCGAAGCTC
GACCCCGTCG AGGCGATGCG GACCGAATAG
 
Protein sequence
MTALLDTIAM ALGTLRSNVL RSVLTLLGIV IGASTVVAMM SLTEGFRLKL TSDFAALGAG 
AFQVQKWPAL QFGHNDRRKY ERRPDLTREQ GEALRDLPHV AYVSIEEWAR RPETLSTREK
ATKNNISVCG GLPDYELANG VEIARGRFIS HTDVQLGRRV IVVGADVQDI LFPGQDPLGQ
EVRVRGVPFE VIGVAEREGS ILGQSKDGWA VVPWTAYERA LGKVRNNNIA VMATTPDDSA
KALEEVVARL RRVRGLAPHE ENDFEIFSND TSAQLFDNLA QMVGAATFGV CALALLVGGI
GVMNIMLVSV TERTREIGIR MALGARRRRI LSQFLVESVT LSALGGLVGV LLGGGLAVAA
REIWQVPASI PAWAVVVSLA SAGGAGLLFG IYPAARASKL DPVEAMRTE