Gene Anae109_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4268 
Symbol 
ID5375668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp5006285 
End bp5007529 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content79% 
IMG OID640845796 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_001381430 
Protein GI153007105 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.117178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCG CGAGCGAGGA GCGGCTCCAC GAGATCCCCT GGGGCGCGCT CGCCGGACGA 
GCCGCGGCGC TCGACGGGGC GCTCGCGGAG ATCCTCGCGG GGGCGCCGGC CGAGCGGATC
GTGGATCGCG TCCTCCGCGC CGACCGCGGC CTCTCCCGCG AGGCCCGCCG CGCGCTCGCG
GAGGCGCTCT TCGGCGTGGG GCTCTGGCGC CGCCGGCTCT ATGCGCAGCT CGGCGACGGC
GCCGCGCCGG CTCGCCTGCT CCTCGCGGCG CTGCTGCGCG ATCTCGCCGG TCGCGACGAC
GCGGAGACCC TCGCGGAGCT CCCTCCCGGC GCGCTCCCGC CCCCGCGACC GCCGCCCGGC
GCGCTCGCCG ATCGCGCCTC GCTCCCGGAC TGGCTCGCCG GCGAGCTCGT CGCCGCGGCC
GGCGAGGAGG CGGGGGCGCT CGCGGACGCC CTGAACCTCC CCGGCCCGCT CTGCCTGCGG
GTGAACCTCC TCCGCGCGAC GCCCGCGGTG GCCGCCGCGC GGCTCGCCGG CGAGGGAGTC
GCGACGCGCC CCGGCCTCCT CGCGCCGGGC TGCCTCGTCG TCGCCTCGTC CCGGCCCAAC
GTCTACGGGC TCGGCGCGCA CCGCGAGGGG CTCGTGGAGG TGCAGGACGA GGGGAGCCAG
CTCCTCGGCG CGCTCGTGGG CGCGCGACCA GGGGAGTCGG TCCTCGACGC CTGCGCCGGC
GCCGGAGGGA AGACGCTCCT GCTCGCGGCC GAGGTGGGCC CCGCGGGCCG CGTCCACGCC
GTCGACCCGG ACCTCGCCCG GCTCGAGCGG CTCAGGGTGC GGGCAGCGCG CGCGGGCGCC
GCCGGGATCG TGGCCTTGGA CGGGGCGGCG CCGGCGGGCG GGCTCCGCGT GGACCGCGCC
CTCGTCGACG CGCCGTGCTC GGAGCTCGGG GCGCTTCGCC GCGGGCCGGA CCTGCGCTGG
CGGCTCGACC CGGCCGCGTT CGCCGCCCTC CCGCCGCTCC AGCTCGAGAT CCTCGAGCGG
GCCGCGGCCT GCGTGAAGCC CGGAGGACGG CTGGTCTACG CGACCTGCAC GTTCCGGCGA
GCGGAGGACG AGGAGGTGGC GATCGCGTTC GAGCGGGCAC ACCCGGAGTG GACCCGGATC
GTACCGAGCG TCGGTGCGTC GACGGTGACG GGCGACGGGT TCGTGCGCAC GTGGCCGCAC
CGGCACGGAA CGGACGGATT CTTCGGGGCG GTGTGGAAGC GATGA
 
Protein sequence
MRPASEERLH EIPWGALAGR AAALDGALAE ILAGAPAERI VDRVLRADRG LSREARRALA 
EALFGVGLWR RRLYAQLGDG AAPARLLLAA LLRDLAGRDD AETLAELPPG ALPPPRPPPG
ALADRASLPD WLAGELVAAA GEEAGALADA LNLPGPLCLR VNLLRATPAV AAARLAGEGV
ATRPGLLAPG CLVVASSRPN VYGLGAHREG LVEVQDEGSQ LLGALVGARP GESVLDACAG
AGGKTLLLAA EVGPAGRVHA VDPDLARLER LRVRAARAGA AGIVALDGAA PAGGLRVDRA
LVDAPCSELG ALRRGPDLRW RLDPAAFAAL PPLQLEILER AAACVKPGGR LVYATCTFRR
AEDEEVAIAF ERAHPEWTRI VPSVGASTVT GDGFVRTWPH RHGTDGFFGA VWKR