Gene Anae109_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4196 
Symbol 
ID5375211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4921157 
End bp4922278 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID640845723 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001381358 
Protein GI153007033 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCCC CGCGAAGTCG AAGGCGACCC GGTGACGCCT GCGCGACTTT GTCGCGCGGC 
TCGTCGGGGG ATCCCTCGTC TCGGGGGAGC GCACGCGAGA AGGCCCGATA TGCTCCCGCA
GTCATGGCCC CCATCGTCCT CACCGGCTGC GCAGGGTTCA TCGGATCTCA CGTCGCGCGG
CGCCTGCTGC GCGATGGGCA CGAGGTGAGC GGGCTCGACA ACCTCAACGA CTACTACGAC
CCCTCGCTCA AGCGGGCGCG GCTCGCGCTG CTCGCGCCGG AGCGCGGCTT CCGGTTCACG
GCCGCCGACG TGGCGGACAG GGAGGCGCTC GACGCGGTGC TCGACGAGGC CGAGCCCGAG
TACGTCGTCC ACCTCGCGGC GCAGGTCGGC GTGCGCAACT CGGTGCGGAA CCCGCGGGCG
TACGCGGAGA CGAACCTCGA CGGCTTCTTC AACGTGCTCG ACGGCTGCGC GCGCCGCGGC
GTGCGGCACC TCGTGTACGC CTCGTCGAGC TCCGTCTACG GCTCGAACGA GAAGGTGCCG
TTCAGCGAGG AGGATCCCGT CGACCATCCG ATCAGCTTCT ACGCCGCGAC GAAGAAGGCG
AACGAGATCA TGGCGCACGC GTACAGCCAC CTGAACCGGC TGCCCACCAC GGGCCTGCGC
TTCTTCACGG TGTACGGGCC GTGGGGCCGC CCGGACATGG CGCCCATCCT GTTCGGGCGC
GCGATCCTGC GCGGCGAGCC GATCACGCTG TTCAACCACG GCCGGATGCT CCGCGACTTC
ACCTACGTCG ACGACGTCGT CGAGGTCGTC ACCGCGCTCG TCCCGCGGCC GCCCGAGCCG
GAGGACGCGG CGCCCTACCG CGTCCTCAAC GTGGGGAACG ACCGGCCCGT CGCCCTGGAG
GAGTTCGTCG CGATCCTCGA GCGGCACCTC GGTCGGCCCG CGCTCCGGAA GTACGCGCCC
ATGCAGCCTG GCGACGTGCC CGCCACCTGG GCGGACGTGA GACGACTGCA GGCGACGGTG
GGGTTCGTGC CGCGCACGCC GATCGAGGAG GGGCTCCGGA GGATGACCGA GTGGCTCGTG
GCGTACGACG GCGACGCACG GAAGGGAGCG CACGCCGGGT GA
 
Protein sequence
MSAPRSRRRP GDACATLSRG SSGDPSSRGS AREKARYAPA VMAPIVLTGC AGFIGSHVAR 
RLLRDGHEVS GLDNLNDYYD PSLKRARLAL LAPERGFRFT AADVADREAL DAVLDEAEPE
YVVHLAAQVG VRNSVRNPRA YAETNLDGFF NVLDGCARRG VRHLVYASSS SVYGSNEKVP
FSEEDPVDHP ISFYAATKKA NEIMAHAYSH LNRLPTTGLR FFTVYGPWGR PDMAPILFGR
AILRGEPITL FNHGRMLRDF TYVDDVVEVV TALVPRPPEP EDAAPYRVLN VGNDRPVALE
EFVAILERHL GRPALRKYAP MQPGDVPATW ADVRRLQATV GFVPRTPIEE GLRRMTEWLV
AYDGDARKGA HAG