Gene Anae109_4191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4191 
SymboltruA 
ID5376206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4915029 
End bp4915766 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content75% 
IMG OID640845718 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_001381353 
Protein GI153007028 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTCG TGAAGCTCGT CCTCGAGTAC GACGGGACCC GCTACGTCGG ATGGCAGGTC 
CAGCCCAACG GCCCGTCGAT CCAGGCCGAG GTCGAGCGGG CCCTCGCGAC CCTCCACAAG
GAGCCGCGGC GCGTGACGGC CGCCGGCCGC ACCGACGCGG GCGTGCACGC GCGCGGGCAG
GTGGTGTCCT TCCCGGAGGC GCGGCCGCTG CCGCTCGCGG CCTACGTGAA GGGGATGAAC
GCGCTCCTGC CCGACGAGGT GGCGGTCCGC GCGGCGAGCG TGGAGCCGGA CGGCTTCGAC
GCGCGGCGGA GCGCCCGGGG CAAGCGGTAC CGCTACGTCC TCGAGAACCT GGAGACGCGC
GCGCCGCTCT CGCGCCTCCA GGCCTGGCAG CTCTTCGGCG CGCTCGACGT CGGGGCGATG
CGCGAGGCGT CGCGCCACCT GCTGGGCCGG CAGGACTTCG CGGCGTTCCA GGCGGCGGAC
TGCGCCTGCG ACCACGCCGT CCGCGAGGTG CACCGCCTCG ACGTGCTCGG CGAGCCCTCG
GGCCGGGTCG AGCTCGTGGT GGAGGCGACC GCGTTCGTGA AGCACATGGT GCGGAACTTC
GTCGGCACGC TGGTCGAGGT CGGGAAGGGG AGGCGCCGCG CGGAGGACAT GCCCGCGCTC
GTCGCCTCGC GCGATCGGAC GCGCGCCGGG CGGACCGCGC CGCCCCAGGG GCTCTTCCTG
GAGGAGGTCT TCTACTGA
 
Protein sequence
MPVVKLVLEY DGTRYVGWQV QPNGPSIQAE VERALATLHK EPRRVTAAGR TDAGVHARGQ 
VVSFPEARPL PLAAYVKGMN ALLPDEVAVR AASVEPDGFD ARRSARGKRY RYVLENLETR
APLSRLQAWQ LFGALDVGAM REASRHLLGR QDFAAFQAAD CACDHAVREV HRLDVLGEPS
GRVELVVEAT AFVKHMVRNF VGTLVEVGKG RRRAEDMPAL VASRDRTRAG RTAPPQGLFL
EEVFY