Gene Anae109_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4172 
Symbol 
ID5375602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4891289 
End bp4892086 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID640845699 
ProductABC transporter, inner membrane subunit 
Protein accessionYP_001381334 
Protein GI153007009 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.185851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.064397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAGCA CCCTCCGCGC CATCCCCACG CTCCTCCGCG TCGGCCTCGC CGAGGCGGTC 
GCCTACCGGG CCGAGATGCT CGTGTGGCTG CTCTCCACGA CGATGCCGCT CGTCATGCTC
GCCCTCATGA GCGCCGTCGC CCGCGAGGCG CCCATCGGCC GCTTCGGGCA GGCGGAGTTC
GGCGCCTACT ACCTCGCCGC GCTGGTGGTG CGGCTCAACG CGGGCGCCTG GGTGATCTGG
GAGGTGAACT TCGAGATCCG CCAGGGGACG CTGGCGTACC GGCTCCTGCG GCCCATCCAT
CCGCTCGTGT CCTACGCCTG CGCCAACGTC GGCGCGATGC CGCTCCGCCT CCTCGCCTCG
ATCCCCGTCG TCGTCCTCGC GCTGGCGACG CTGGGGACGG GCCGCTTCAC CCAGGACCCG
CTGCTCCTCG CGCTCTTCCC GCTCACGGTG ATCGGCGCGT GGCTCATCAC CTTCCTCGCC
ATGGCGGTCA TCGGCGCGCT CGCCTTCGCG ATCGACTCGT CCTCGTCCGT GTTCGAGCTG
TGGCTCGGGC TCTACGGCGT GTTCTCCGGG TACCTCGTCC CGCTCGAGCT CTTCCCGCGC
TGGCTCGAGG TGACCGCGAA GGTGTCGCCG TTCCGCTTCA TGCTCTCCTT CCCGGTCGAG
ATGATCATCG GGCTGACGCC GCGGGCGGAC GCGCTGCGCG AGCTCGCCAT CCAGTGGACG
TACGTGGCCG TGCTCGCGCT CGCCGCCCGG ATCACCTGGC GGGCCGGGCT GCGCCGCTTC
GCCGCGTTCG GGGGCTGA
 
Protein sequence
MRSTLRAIPT LLRVGLAEAV AYRAEMLVWL LSTTMPLVML ALMSAVAREA PIGRFGQAEF 
GAYYLAALVV RLNAGAWVIW EVNFEIRQGT LAYRLLRPIH PLVSYACANV GAMPLRLLAS
IPVVVLALAT LGTGRFTQDP LLLALFPLTV IGAWLITFLA MAVIGALAFA IDSSSSVFEL
WLGLYGVFSG YLVPLELFPR WLEVTAKVSP FRFMLSFPVE MIIGLTPRAD ALRELAIQWT
YVAVLALAAR ITWRAGLRRF AAFGG